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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
110 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183470281
OMEJ01012158
399266
Bacillota
>WENV183470219
OMEJ01006323
449573
Bacillota
>WENV183470266
OMEJ01010603
443965
Bacillota
>WENV183469806
OMEJ01000159
73638
Bacillota
AAG
Leu
>WENV183469929
OMEJ01000328
58120
Bacillota
AAG
Leu
>WENV183470217
OMEJ01006232
47133
Bacillota
AAG
Leu
>WENV183470122
OMEJ01002180
212982
Bacillota
ACG
Arg
>WENV183470005
OMEJ01000592
179176
Bacillota
ACG
Arg
>WENV183470071
OMEJ01001446
179176
Bacillota
ACG
Arg
>WENV183470037
OMEJ01000826
175831
Bacillota
ACG
Arg
>WENV183470228
OMEJ01006574
73616
Bacillota
CAA
Leu
>WENV183469954
OMEJ01000394
175842
Bacillota
CAC
Val
>WENV183469716
OMEJ01000061
73664
Bacillota
CAG
Leu
>WENV183469785
OMEJ01000142
73664
Bacillota
CAG
Leu
>WENV183469625
OMEJ01000019
73009
Bacillota
CAG
Leu
>WENV183469733
OMEJ01000078
73009
Bacillota
CAG
Leu
>WENV183470216
OMEJ01006172
100225
Bacillota
CAG
Leu
>WENV183470084
OMEJ01001646
184687
Bacillota
CAT
Met
>WENV183469972
OMEJ01000468
215243
Bacillota
CAT
Met
>WENV183469834
OMEJ01000192
190476
Bacillota
CAT
Met
>WENV183470365
OMEJ01034606
190476
Bacillota
CAT
Met
>WENV183470086
OMEJ01001688
229413
Bacillota
CAT
Met
>WENV183469719
OMEJ01000063
187364
Bacillota
CAT
Met
>WENV183469922
OMEJ01000316
187364
Bacillota
CAT
Met
>WENV183470166
OMEJ01004016
399041
Bacillota
CCA
Trp
>WENV183469941
OMEJ01000358
497729
Bacillota
CCA
Trp
>WENV183470059
OMEJ01001033
497729
Bacillota
CCA
Trp
>WENV183470082
OMEJ01001646
497729
Bacillota
CCA
Trp
>WENV183470112
OMEJ01002120
497729
Bacillota
CCA
Trp
>WENV183470035
OMEJ01000809
483485
Bacillota
CCC
Gly
>WENV183470238
OMEJ01007087
400614
Bacillota
CCG
Arg
>WENV183469836
OMEJ01000192
179755
Bacillota
CCG
Arg
>WENV183469994
OMEJ01000531
291581
Bacillota
CGG
Pro
>WENV183470194
OMEJ01005219
398854
Bacillota
CTC
Glu
>WENV183469721
OMEJ01000067
398852
Bacillota
CTC
Glu
>WENV183469722
OMEJ01000067
398852
Bacillota
CTC
Glu
>WENV183469723
OMEJ01000067
398852
Bacillota
CTC
Glu
>WENV183470257
OMEJ01009014
407726
Bacillota
CTG
Gln
>WENV183469618
OMEJ01000010
480322
Bacillota
CTG
Gln
>WENV183469993
OMEJ01000531
480322
Bacillota
CTG
Gln
>WENV183470128
OMEJ01002292
284016
Bacillota
CTT
Lys
>WENV183470195
OMEJ01005219
322848
Bacillota
CTT
Lys
>WENV183469996
OMEJ01000534
330413
Bacillota
CTT
Lys
>WENV183469710
OMEJ01000059
280428
Bacillota
GAA
Phe
>WENV183470199
OMEJ01005433
344985
Bacillota
GAA
Phe
>WENV183470048
OMEJ01000918
280447
Bacillota
GAC
Val
>WENV183470383
OMEJ01040227
198522
Bacillota
GAT
Ile
>WENV183470302
OMEJ01015938
201856
Bacillota
GAT
Ile
>WENV183469991
OMEJ01000531
405363
Bacillota
GCA
Cys
>WENV183470153
OMEJ01003562
481167
Bacillota
GCA
Cys
>WENV183469903
OMEJ01000287
481217
Bacillota
GCA
Cys
>WENV183469940
OMEJ01000358
343590
Bacillota
GCC
Gly
>WENV183469711
OMEJ01000059
349107
Bacillota
GCC
Gly
>WENV183469931
OMEJ01000334
398835
Bacillota
GCC
Gly
>WENV183469798
OMEJ01000151
321753
Bacillota
GCC
Gly
>WENV183470211
OMEJ01005470
20460
Bacillota
GCT
Ser
>WENV183469855
OMEJ01000214
27216
Bacillota
GCT
Ser
>WENV183470296
OMEJ01014505
27216
Bacillota
GCT
Ser
>WENV183470324
OMEJ01021423
20461
Bacillota
GGA
Ser
>WENV183469933
OMEJ01000338
184497
Bacillota
GGG
Pro
>WENV183470079
OMEJ01001582
184497
Bacillota
GGG
Pro
>WENV183470127
OMEJ01002276
283760
Bacillota
GGT
Thr
>WENV183469736
OMEJ01000080
280444
Bacillota
GGT
Thr
>WENV183470276
OMEJ01011668
120584
Bacillota
GTA
Tyr
>WENV183469705
OMEJ01000054
118669
Bacillota
GTA
Tyr
>WENV183469725
OMEJ01000072
118669
Bacillota
GTA
Tyr
>WENV183469963
OMEJ01000429
118359
Bacillota
GTA
Tyr
>WENV183470221
OMEJ01006323
176678
Bacillota
GTC
Asp
>WENV183470119
OMEJ01002180
281417
Bacillota
GTC
Asp
>WENV183470021
OMEJ01000664
175911
Bacillota
GTC
Asp
>WENV183470175
OMEJ01004408
330433
Bacillota
GTG
His
>WENV183469874
OMEJ01000223
175857
Bacillota
GTG
His
>WENV183469830
OMEJ01000188
348419
Bacillota
GTT
Asn
>WENV183470134
OMEJ01002486
184086
Bacillota
GTT
Asn
>WENV183470244
OMEJ01007605
280641
Bacillota
GTT
Asn
>WENV183469713
OMEJ01000059
175868
Bacillota
GTT
Asn
>WENV183470121
OMEJ01002180
46774
Bacillota
TAA
Leu
>WENV183469726
OMEJ01000072
82124
Bacillota
TAA
Leu
>WENV183470204
OMEJ01005463
46821
Bacillota
TAA
Leu
>WENV183470331
OMEJ01023986
74812
Bacillota
TAA
Leu
>WENV183470268
OMEJ01010603
298270
Bacillota
TAC
Val
>WENV183470083
OMEJ01001646
284723
Bacillota
TAC
Val
>WENV183470247
OMEJ01007605
141454
Bacillota
TAG
Leu
>WENV183470201
OMEJ01005463
120110
Bacillota
TAG
Leu
>WENV183470173
OMEJ01004408
480520
Bacillota
TCC
Gly
>WENV183470267
OMEJ01010603
480359
Bacillota
TCC
Gly
>WENV183470248
OMEJ01007605
176014
Bacillota
TCT
Arg
>WENV183469745
OMEJ01000092
175859
Bacillota
TCT
Arg
>WENV183469873
OMEJ01000223
179810
Bacillota
TCT
Arg
>WENV183470273
OMEJ01011201
178972
Bacillota
TCT
Arg
>WENV183470174
OMEJ01004408
203851
Bacillota
TCT
Arg
>WENV183469818
OMEJ01000168
52748
Bacillota
TGA
Ser
>WENV183470046
OMEJ01000918
56074
Bacillota
TGA
Ser
>WENV183470263
OMEJ01010210
280646
Bacillota
TGC
Ala
>WENV183470171
OMEJ01004405
295350
Bacillota
TGC
Ala
>WENV183470212
OMEJ01005552
323864
Bacillota
TGC
Ala
>WENV183470355
OMEJ01031701
292374
Bacillota
TGC
Ala
>WENV183470123
OMEJ01002180
208754
Bacillota
TGG
Pro
>WENV183470245
OMEJ01007605
418726
Bacillota
TGT
Thr
>WENV183470290
OMEJ01013679
282867
Bacillota
TGT
Thr
>WENV183469770
OMEJ01000119
303718
Bacillota
TGT
Thr
>WENV183469729
OMEJ01000075
398833
Bacillota
TGT
Thr
>WENV183470288
OMEJ01013679
178143
Bacillota
TTC
Glu
>WENV183469927
OMEJ01000323
398857
Bacillota
TTC
Glu
>WENV183469835
OMEJ01000192
398832
Bacillota
TTC
Glu
>WENV183469890
OMEJ01000257
401685
Bacillota
TTG
Gln
>WENV183469995
OMEJ01000531
480324
Bacillota
TTG
Gln
>WENV183470113
OMEJ01002131
280639
Bacillota
TTT
Lys
>WENV183470177
OMEJ01004408
354380
Bacillota
TTT
Lys
>WENV183470235
OMEJ01006985
280476
Bacillota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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