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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
57 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183476194
OMEW01028893
99852
Bacillota
GTA
Tyr
>WENV183476272
OMEW01051404
343590
Bacillota
GCC
Gly
>WENV183476171
OMEW01022476
280500
Bacillota
TGC
Ala
>WENV183475733
OMEW01000457
349107
Bacillota
GCC
Gly
>WENV183475735
OMEW01000457
349107
Bacillota
GCC
Gly
>WENV183475736
OMEW01000457
405363
Bacillota
GCA
Cys
>WENV183475732
OMEW01000457
280428
Bacillota
GAA
Phe
>WENV183476106
OMEW01013778
280492
Bacillota
CTT
Lys
>WENV183475584
OMEW01000083
175842
Bacillota
CAC
Val
>WENV183475969
OMEW01003965
291629
Bacillota
CCA
Trp
>WENV183476218
OMEW01033788
236579
Bacillota
GAT
Ile
>WENV183476217
OMEW01033788
295166
Bacillota
TGC
Ala
>WENV183475698
OMEW01000333
190476
Bacillota
CAT
Met
>WENV183475713
OMEW01000374
190476
Bacillota
CAT
Met
>WENV183475494
OMEW01000024
73664
Bacillota
CAG
Leu
>WENV183475766
OMEW01000559
280447
Bacillota
GAC
Val
>WENV183476043
OMEW01007456
280447
Bacillota
GAC
Val
>WENV183475917
OMEW01002649
186123
Bacillota
GTC
Asp
>WENV183475712
OMEW01000373
73009
Bacillota
CAG
Leu
>WENV183476198
OMEW01029902
481217
Bacillota
GCA
Cys
>WENV183475858
OMEW01001543
291581
Bacillota
CGG
Pro
>WENV183475633
OMEW01000142
175859
Bacillota
TCT
Arg
>WENV183475912
OMEW01002581
175831
Bacillota
ACG
Arg
>WENV183475554
OMEW01000050
179810
Bacillota
TCT
Arg
>WENV183475929
OMEW01002810
284627
Bacillota
GAA
Phe
>WENV183475983
OMEW01004570
346451
Bacillota
TTT
Lys
>WENV183476170
OMEW01022476
175916
Bacillota
GAT
Ile
>WENV183475485
OMEW01000017
480322
Bacillota
CTG
Gln
>WENV183475857
OMEW01001543
480322
Bacillota
CTG
Gln
>WENV183475650
OMEW01000172
175868
Bacillota
GTT
Asn
>WENV183475894
OMEW01002252
175868
Bacillota
GTT
Asn
>WENV183475846
OMEW01001313
322848
Bacillota
CTT
Lys
>WENV183475893
OMEW01002252
398854
Bacillota
CTC
Glu
>WENV183476115
OMEW01014776
291576
Bacillota
CCC
Gly
>WENV183475731
OMEW01000457
480324
Bacillota
TTG
Gln
>WENV183475797
OMEW01000829
497729
Bacillota
CCA
Trp
>WENV183475542
OMEW01000047
175899
Bacillota
GTC
Asp
>WENV183475757
OMEW01000525
303718
Bacillota
TGT
Thr
>WENV183476197
OMEW01029642
186051
Bacillota
GAT
Ile
>WENV183475848
OMEW01001320
280444
Bacillota
GGT
Thr
>WENV183475850
OMEW01001320
280444
Bacillota
GGT
Thr
>WENV183475767
OMEW01000560
179755
Bacillota
CCG
Arg
>WENV183475699
OMEW01000333
398832
Bacillota
TTC
Glu
>WENV183475714
OMEW01000374
398832
Bacillota
TTC
Glu
>WENV183475545
OMEW01000047
118669
Bacillota
GTA
Tyr
>WENV183475471
OMEW01000011
398852
Bacillota
CTC
Glu
>WENV183476247
OMEW01043220
201856
Bacillota
GAT
Ile
>WENV183476101
OMEW01013082
298260
Bacillota
GTT
Asn
>WENV183475555
OMEW01000050
175857
Bacillota
GTG
His
>WENV183475483
OMEW01000016
285756
Bacillota
GCC
Gly
>WENV183475689
OMEW01000307
398833
Bacillota
TGT
Thr
>WENV183475734
OMEW01000457
175849
Bacillota
GTC
Asp
>WENV183475849
OMEW01001320
175849
Bacillota
GTC
Asp
>WENV183475918
OMEW01002649
405393
Bacillota
GCC
Gly
>WENV183475863
OMEW01001647
56074
Bacillota
TGA
Ser
>WENV183476026
OMEW01006904
56074
Bacillota
TGA
Ser
>WENV183475819
OMEW01001078
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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