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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
68 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183478163
OMFD01000402
99852
Bacillota
GTA
Tyr
>WENV183478431
OMFD01002790
99852
Bacillota
GTA
Tyr
>WENV183478430
OMFD01002790
405363
Bacillota
GCA
Cys
>WENV183478376
OMFD01001908
280428
Bacillota
GAA
Phe
>WENV183478712
OMFD01024376
291579
Bacillota
GAA
Phe
>WENV183478325
OMFD01001226
280492
Bacillota
CTT
Lys
>WENV183478302
OMFD01001021
175842
Bacillota
CAC
Val
>WENV183478314
OMFD01001121
175842
Bacillota
CAC
Val
>WENV183478680
OMFD01018686
184497
Bacillota
GGG
Pro
>WENV183478643
OMFD01013432
179176
Bacillota
ACG
Arg
>WENV183478716
OMFD01024887
184687
Bacillota
CAT
Met
>WENV183478579
OMFD01007682
295166
Bacillota
TGC
Ala
>WENV183478109
OMFD01000239
190476
Bacillota
CAT
Met
>WENV183478256
OMFD01000875
190476
Bacillota
CAT
Met
>WENV183478128
OMFD01000272
5692
Bacillota
GCT
Ser
>WENV183478162
OMFD01000402
73009
Bacillota
CAG
Leu
>WENV183478172
OMFD01000439
73009
Bacillota
CAG
Leu
>WENV183478327
OMFD01001230
73009
Bacillota
CAG
Leu
>WENV183478613
OMFD01008827
189473
Bacillota
GAT
Ile
>WENV183478761
OMFD01035473
291581
Bacillota
CGG
Pro
>WENV183478118
OMFD01000263
175859
Bacillota
TCT
Arg
>WENV183478670
OMFD01016736
398835
Bacillota
GCC
Gly
>WENV183478080
OMFD01000164
175831
Bacillota
ACG
Arg
>WENV183478215
OMFD01000587
284627
Bacillota
GAA
Phe
>WENV183478548
OMFD01006320
284627
Bacillota
GAA
Phe
>WENV183477988
OMFD01000035
294020
Bacillota
TAC
Val
>WENV183478106
OMFD01000226
480322
Bacillota
CTG
Gln
>WENV183478223
OMFD01000636
480322
Bacillota
CTG
Gln
>WENV183477989
OMFD01000035
187364
Bacillota
CAT
Met
>WENV183478157
OMFD01000360
175868
Bacillota
GTT
Asn
>WENV183478188
OMFD01000516
175868
Bacillota
GTT
Asn
>WENV183478156
OMFD01000360
398854
Bacillota
CTC
Glu
>WENV183478187
OMFD01000516
398854
Bacillota
CTC
Glu
>WENV183478116
OMFD01000254
291576
Bacillota
CCC
Gly
>WENV183478322
OMFD01001212
291576
Bacillota
CCC
Gly
>WENV183478723
OMFD01025770
287280
Bacillota
TGT
Thr
>WENV183478241
OMFD01000712
480324
Bacillota
TTG
Gln
>WENV183478641
OMFD01013347
56079
Bacillota
AAG
Leu
>WENV183478717
OMFD01025217
186051
Bacillota
GAT
Ile
>WENV183478778
OMFD01040025
186051
Bacillota
GAT
Ile
>WENV183478722
OMFD01025770
398857
Bacillota
TTC
Glu
>WENV183478251
OMFD01000813
117745
Bacillota
GTA
Tyr
>WENV183478137
OMFD01000328
280444
Bacillota
GGT
Thr
>WENV183478141
OMFD01000328
280444
Bacillota
GGT
Thr
>WENV183477971
OMFD01000003
483485
Bacillota
CCC
Gly
>WENV183478438
OMFD01002945
46643
Bacillota
TGA
Ser
>WENV183478111
OMFD01000239
179755
Bacillota
CCG
Arg
>WENV183478386
OMFD01002010
179755
Bacillota
CCG
Arg
>WENV183478422
OMFD01002699
179755
Bacillota
CCG
Arg
>WENV183478346
OMFD01001566
46835
Bacillota
TAA
Leu
>WENV183478110
OMFD01000239
398832
Bacillota
TTC
Glu
>WENV183478257
OMFD01000875
398832
Bacillota
TTC
Glu
>WENV183478148
OMFD01000349
118669
Bacillota
GTA
Tyr
>WENV183478213
OMFD01000587
118669
Bacillota
GTA
Tyr
>WENV183478074
OMFD01000150
280462
Bacillota
GAA
Phe
>WENV183478228
OMFD01000655
398852
Bacillota
CTC
Glu
>WENV183478229
OMFD01000655
398852
Bacillota
CTC
Glu
>WENV183478264
OMFD01000894
398852
Bacillota
CTC
Glu
>WENV183478174
OMFD01000442
406186
Bacillota
CTC
Glu
>WENV183478208
OMFD01000576
285601
Bacillota
TTC
Glu
>WENV183478364
OMFD01001709
285601
Bacillota
TTC
Glu
>WENV183478094
OMFD01000202
175857
Bacillota
GTG
His
>WENV183478521
OMFD01005618
398833
Bacillota
TGT
Thr
>WENV183478140
OMFD01000328
175849
Bacillota
GTC
Asp
>WENV183478216
OMFD01000587
280463
Bacillota
TTT
Lys
>WENV183478127
OMFD01000272
56074
Bacillota
TGA
Ser
>WENV183478441
OMFD01003105
280473
Bacillota
TGG
Pro
>WENV183478558
OMFD01006805
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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