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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
34 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183479123
OMFF01002356
99852
Bacillota
GTA
Tyr
>WENV183479266
OMFF01007402
212982
Bacillota
ACG
Arg
>WENV183479343
OMFF01013939
405363
Bacillota
GCA
Cys
>WENV183479066
OMFF01001117
280492
Bacillota
CTT
Lys
>WENV183478964
OMFF01000276
175842
Bacillota
CAC
Val
>WENV183479541
OMFF01044560
184687
Bacillota
CAT
Met
>WENV183479046
OMFF01000848
73664
Bacillota
CAG
Leu
>WENV183478965
OMFF01000276
280447
Bacillota
GAC
Val
>WENV183479284
OMFF01008441
5692
Bacillota
GCT
Ser
>WENV183479381
OMFF01017012
284723
Bacillota
TAC
Val
>WENV183479054
OMFF01000930
73009
Bacillota
CAG
Leu
>WENV183479174
OMFF01003781
291581
Bacillota
CGG
Pro
>WENV183479273
OMFF01007822
175859
Bacillota
TCT
Arg
>WENV183479390
OMFF01019018
280436
Bacillota
TGC
Ala
>WENV183479505
OMFF01036608
175831
Bacillota
ACG
Arg
>WENV183479420
OMFF01023639
291634
Bacillota
GAA
Phe
>WENV183479155
OMFF01003121
281302
Bacillota
GTG
His
>WENV183479173
OMFF01003781
480322
Bacillota
CTG
Gln
>WENV183479168
OMFF01003574
291576
Bacillota
CCC
Gly
>WENV183479499
OMFF01035837
497729
Bacillota
CCA
Trp
>WENV183479271
OMFF01007811
303718
Bacillota
TGT
Thr
>WENV183479108
OMFF01002074
56079
Bacillota
AAG
Leu
>WENV183479479
OMFF01032458
186051
Bacillota
GAT
Ile
>WENV183479081
OMFF01001468
117745
Bacillota
GTA
Tyr
>WENV183479035
OMFF01000709
280444
Bacillota
GGT
Thr
>WENV183479036
OMFF01000709
280444
Bacillota
GGT
Thr
>WENV183479157
OMFF01003121
354380
Bacillota
TTT
Lys
>WENV183479170
OMFF01003653
46643
Bacillota
TGA
Ser
>WENV183479374
OMFF01016771
46835
Bacillota
TAA
Leu
>WENV183479020
OMFF01000564
398832
Bacillota
TTC
Glu
>WENV183479038
OMFF01000731
398852
Bacillota
CTC
Glu
>WENV183479243
OMFF01006639
289123
Bacillota
GGT
Thr
>WENV183479034
OMFF01000709
175849
Bacillota
GTC
Asp
>WENV183479055
OMFF01000943
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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