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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
48 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183480774
OMFJ01003918
99852
Bacillota
GTA
Tyr
>WENV183480641
OMFJ01000995
280428
Bacillota
GAA
Phe
>WENV183480709
OMFJ01002071
291579
Bacillota
GAA
Phe
>WENV183480818
OMFJ01005254
229015
Bacillota
GTG
His
>WENV183480711
OMFJ01002071
280466
Bacillota
TAC
Val
>WENV183480498
OMFJ01000107
280492
Bacillota
CTT
Lys
>WENV183480682
OMFJ01001413
280492
Bacillota
CTT
Lys
>WENV183480901
OMFJ01008666
179176
Bacillota
ACG
Arg
>WENV183480875
OMFJ01007450
82124
Bacillota
TAA
Leu
>WENV183480502
OMFJ01000126
73664
Bacillota
CAG
Leu
>WENV183480778
OMFJ01004076
280447
Bacillota
GAC
Val
>WENV183480917
OMFJ01010197
5692
Bacillota
GCT
Ser
>WENV183480948
OMFJ01012273
73009
Bacillota
CAG
Leu
>WENV183480853
OMFJ01006611
175859
Bacillota
TCT
Arg
>WENV183480953
OMFJ01012885
175831
Bacillota
ACG
Arg
>WENV183481032
OMFJ01022316
187589
Bacillota
CAT
Met
>WENV183480825
OMFJ01005829
284627
Bacillota
GAA
Phe
>WENV183480754
OMFJ01003360
480322
Bacillota
CTG
Gln
>WENV183481079
OMFJ01032960
187364
Bacillota
CAT
Met
>WENV183480911
OMFJ01009687
175868
Bacillota
GTT
Asn
>WENV183480771
OMFJ01003849
322848
Bacillota
CTT
Lys
>WENV183480770
OMFJ01003849
398854
Bacillota
CTC
Glu
>WENV183481047
OMFJ01026300
291576
Bacillota
CCC
Gly
>WENV183481001
OMFJ01017395
480324
Bacillota
TTG
Gln
>WENV183480868
OMFJ01007322
497729
Bacillota
CCA
Trp
>WENV183480734
OMFJ01002495
56079
Bacillota
AAG
Leu
>WENV183480878
OMFJ01007578
323864
Bacillota
TGC
Ala
>WENV183481021
OMFJ01020445
204381
Bacillota
GAT
Ile
>WENV183480527
OMFJ01000228
117745
Bacillota
GTA
Tyr
>WENV183480713
OMFJ01002071
280444
Bacillota
GGT
Thr
>WENV183480784
OMFJ01004267
483485
Bacillota
CCC
Gly
>WENV183480607
OMFJ01000740
46643
Bacillota
TGA
Ser
>WENV183480710
OMFJ01002071
321753
Bacillota
GCC
Gly
>WENV183480679
OMFJ01001362
179755
Bacillota
CCG
Arg
>WENV183480963
OMFJ01013393
46835
Bacillota
TAA
Leu
>WENV183480970
OMFJ01014322
398832
Bacillota
TTC
Glu
>WENV183480742
OMFJ01002915
280462
Bacillota
GAA
Phe
>WENV183480724
OMFJ01002299
398852
Bacillota
CTC
Glu
>WENV183480935
OMFJ01010993
280483
Bacillota
GAA
Phe
>WENV183481084
OMFJ01034701
406186
Bacillota
CTC
Glu
>WENV183480938
OMFJ01011125
285601
Bacillota
TTC
Glu
>WENV183480847
OMFJ01006323
175857
Bacillota
GTG
His
>WENV183480936
OMFJ01010993
285756
Bacillota
GCC
Gly
>WENV183480855
OMFJ01006654
398833
Bacillota
TGT
Thr
>WENV183480712
OMFJ01002071
175849
Bacillota
GTC
Asp
>WENV183480849
OMFJ01006323
280463
Bacillota
TTT
Lys
>WENV183480916
OMFJ01010197
56074
Bacillota
TGA
Ser
>WENV183481064
OMFJ01029729
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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