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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
25 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183481996
OMFL01000413
349107
Bacillota
GCC
Gly
>WENV183481995
OMFL01000413
280428
Bacillota
GAA
Phe
>WENV183482021
OMFL01001107
179917
Bacillota
CAT
Met
>WENV183481997
OMFL01000413
280466
Bacillota
TAC
Val
>WENV183481991
OMFL01000377
190476
Bacillota
CAT
Met
>WENV183482053
OMFL01002293
82124
Bacillota
TAA
Leu
>WENV183482004
OMFL01000516
280447
Bacillota
GAC
Val
>WENV183482071
OMFL01004164
5692
Bacillota
GCT
Ser
>WENV183482064
OMFL01003673
73009
Bacillota
CAG
Leu
>WENV183482027
OMFL01001336
175859
Bacillota
TCT
Arg
>WENV183481994
OMFL01000408
175831
Bacillota
ACG
Arg
>WENV183482026
OMFL01001259
480322
Bacillota
CTG
Gln
>WENV183482135
OMFL01018769
398854
Bacillota
CTC
Glu
>WENV183482058
OMFL01002837
480324
Bacillota
TTG
Gln
>WENV183482017
OMFL01000989
56079
Bacillota
AAG
Leu
>WENV183481999
OMFL01000413
280444
Bacillota
GGT
Thr
>WENV183482069
OMFL01004138
179755
Bacillota
CCG
Arg
>WENV183481992
OMFL01000377
398832
Bacillota
TTC
Glu
>WENV183482043
OMFL01001851
280483
Bacillota
GAA
Phe
>WENV183482091
OMFL01008200
175857
Bacillota
GTG
His
>WENV183481982
OMFL01000100
398833
Bacillota
TGT
Thr
>WENV183481998
OMFL01000413
175849
Bacillota
GTC
Asp
>WENV183482093
OMFL01008200
280463
Bacillota
TTT
Lys
>WENV183482070
OMFL01004164
56074
Bacillota
TGA
Ser
>WENV183482005
OMFL01000553
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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