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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
60 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183485478
OMFQ01000067
404076
Bacillota
GCC
Gly
>WENV183485580
OMFQ01000276
404076
Bacillota
GCC
Gly
>WENV183485694
OMFQ01000670
404076
Bacillota
GCC
Gly
>WENV183485906
OMFQ01006245
349107
Bacillota
GCC
Gly
>WENV183485477
OMFQ01000067
184504
Bacillota
GTC
Asp
>WENV183485693
OMFQ01000670
184504
Bacillota
GTC
Asp
>WENV183485959
OMFQ01011652
290391
Bacillota
TAC
Val
>WENV183485679
OMFQ01000589
183994
Bacillota
TCT
Arg
>WENV183485681
OMFQ01000595
280492
Bacillota
CTT
Lys
>WENV183485739
OMFQ01000977
280492
Bacillota
CTT
Lys
>WENV183485923
OMFQ01007312
231532
Bacillota
ACG
Arg
>WENV183485972
OMFQ01012748
454823
Bacillota
TTG
Gln
>WENV183485571
OMFQ01000266
101000
Bacillota
GTA
Tyr
>WENV183485520
OMFQ01000142
404079
Bacillota
CAT
Met
>WENV183485879
OMFQ01004447
190476
Bacillota
CAT
Met
>WENV183485674
OMFQ01000579
184522
Bacillota
CCT
Arg
>WENV183485508
OMFQ01000109
73664
Bacillota
CAG
Leu
>WENV183485564
OMFQ01000259
47207
Bacillota
TGA
Ser
>WENV183485612
OMFQ01000351
359682
Bacillota
TAC
Val
>WENV183486007
OMFQ01017444
481217
Bacillota
GCA
Cys
>WENV183485795
OMFQ01001894
452735
Bacillota
GCC
Gly
>WENV183485574
OMFQ01000266
183993
Bacillota
CAT
Met
>WENV183485573
OMFQ01000266
289149
Bacillota
GGT
Thr
>WENV183485740
OMFQ01000987
47166
Bacillota
CGA
Ser
>WENV183485608
OMFQ01000351
289147
Bacillota
GTT
Asn
>WENV183485539
OMFQ01000206
289475
Bacillota
GTG
His
>WENV183485709
OMFQ01000759
241041
Bacillota
CGG
Pro
>WENV183485553
OMFQ01000222
183957
Bacillota
CCT
Arg
>WENV183486020
OMFQ01019880
295350
Bacillota
TGC
Ala
>WENV183485677
OMFQ01000589
200900
Bacillota
TGG
Pro
>WENV183485565
OMFQ01000259
184455
Bacillota
GTC
Asp
>WENV183485635
OMFQ01000423
289476
Bacillota
CGT
Thr
>WENV183485797
OMFQ01001894
48832
Bacillota
TAA
Leu
>WENV183485991
OMFQ01015065
497729
Bacillota
CCA
Trp
>WENV183485507
OMFQ01000109
56079
Bacillota
AAG
Leu
>WENV183485919
OMFQ01006943
323864
Bacillota
TGC
Ala
>WENV183486063
OMFQ01029151
292374
Bacillota
TGC
Ala
>WENV183485609
OMFQ01000351
403952
Bacillota
CTG
Gln
>WENV183485528
OMFQ01000164
117745
Bacillota
GTA
Tyr
>WENV183485604
OMFQ01000337
46643
Bacillota
TGA
Ser
>WENV183485566
OMFQ01000259
100999
Bacillota
GAG
Leu
>WENV183485610
OMFQ01000351
289745
Bacillota
TTT
Lys
>WENV183485718
OMFQ01000826
179755
Bacillota
CCG
Arg
>WENV183485482
OMFQ01000074
289154
Bacillota
CTT
Lys
>WENV183485880
OMFQ01004447
398832
Bacillota
TTC
Glu
>WENV183485958
OMFQ01011652
175915
Bacillota
GTC
Asp
>WENV183485613
OMFQ01000352
280462
Bacillota
GAA
Phe
>WENV183485530
OMFQ01000167
398852
Bacillota
CTC
Glu
>WENV183485706
OMFQ01000757
398852
Bacillota
CTC
Glu
>WENV183485680
OMFQ01000589
404085
Bacillota
CCG
Arg
>WENV183485413
OMFQ01000001
280483
Bacillota
GAA
Phe
>WENV183486006
OMFQ01017317
298260
Bacillota
GTT
Asn
>WENV183485703
OMFQ01000715
183995
Bacillota
GGG
Pro
>WENV183485823
OMFQ01002616
175857
Bacillota
GTG
His
>WENV183485414
OMFQ01000001
285756
Bacillota
GCC
Gly
>WENV183485768
OMFQ01001354
184523
Bacillota
GAC
Val
>WENV183485540
OMFQ01000206
403766
Bacillota
TTG
Gln
>WENV183485825
OMFQ01002616
280463
Bacillota
TTT
Lys
>WENV183485796
OMFQ01001894
489283
Bacillota
GCA
Cys
>WENV183485583
OMFQ01000281
482078
Bacillota
CCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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