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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
21 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183487417
OMFW01011828
404076
Bacillota
GCC
Gly
>WENV183487416
OMFW01011828
184504
Bacillota
GTC
Asp
>WENV183487354
OMFW01003515
280428
Bacillota
GAA
Phe
>WENV183487296
OMFW01000391
179563
Bacillota
GAT
Ile
>WENV183487295
OMFW01000391
295166
Bacillota
TGC
Ala
>WENV183487370
OMFW01005207
73664
Bacillota
CAG
Leu
>WENV183487376
OMFW01005842
73009
Bacillota
CAG
Leu
>WENV183487409
OMFW01010660
401685
Bacillota
TTG
Gln
>WENV183487381
OMFW01006568
175868
Bacillota
GTT
Asn
>WENV183487338
OMFW01002493
56079
Bacillota
AAG
Leu
>WENV183487325
OMFW01002110
117745
Bacillota
GTA
Tyr
>WENV183487402
OMFW01009917
280444
Bacillota
GGT
Thr
>WENV183487358
OMFW01003600
46643
Bacillota
TGA
Ser
>WENV183487424
OMFW01013876
179755
Bacillota
CCG
Arg
>WENV183487327
OMFW01002110
280462
Bacillota
GAA
Phe
>WENV183487297
OMFW01000401
398852
Bacillota
CTC
Glu
>WENV183487351
OMFW01003480
404085
Bacillota
CCG
Arg
>WENV183487408
OMFW01010660
175857
Bacillota
GTG
His
>WENV183487362
OMFW01003863
285756
Bacillota
GCC
Gly
>WENV183487328
OMFW01002110
280463
Bacillota
TTT
Lys
>WENV183487347
OMFW01003375
56074
Bacillota
TGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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