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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
54 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183488063
OMFY01002747
99852
Bacillota
GTA
Tyr
>WENV183488447
OMFY01038446
343590
Bacillota
GCC
Gly
>WENV183487953
OMFY01001261
349107
Bacillota
GCC
Gly
>WENV183488115
OMFY01003755
405363
Bacillota
GCA
Cys
>WENV183487952
OMFY01001261
280428
Bacillota
GAA
Phe
>WENV183487785
OMFY01000292
424998
Bacillota
GCC
Gly
>WENV183487954
OMFY01001261
280466
Bacillota
TAC
Val
>WENV183487677
OMFY01000165
280492
Bacillota
CTT
Lys
>WENV183488160
OMFY01005446
175842
Bacillota
CAC
Val
>WENV183488228
OMFY01007377
175842
Bacillota
CAC
Val
>WENV183488373
OMFY01020868
236579
Bacillota
GAT
Ile
>WENV183488292
OMFY01011777
348419
Bacillota
GTT
Asn
>WENV183488080
OMFY01003066
406553
Bacillota
TTG
Gln
>WENV183488372
OMFY01020868
295166
Bacillota
TGC
Ala
>WENV183487553
OMFY01000013
73664
Bacillota
CAG
Leu
>WENV183488133
OMFY01004275
280447
Bacillota
GAC
Val
>WENV183488230
OMFY01007620
280447
Bacillota
GAC
Val
>WENV183488072
OMFY01002978
73009
Bacillota
CAG
Leu
>WENV183488050
OMFY01002491
291581
Bacillota
CGG
Pro
>WENV183487957
OMFY01001262
175859
Bacillota
TCT
Arg
>WENV183487909
OMFY01000891
175831
Bacillota
ACG
Arg
>WENV183487973
OMFY01001473
175831
Bacillota
ACG
Arg
>WENV183488353
OMFY01018549
200465
Bacillota
GAT
Ile
>WENV183488049
OMFY01002491
480322
Bacillota
CTG
Gln
>WENV183488196
OMFY01006422
175868
Bacillota
GTT
Asn
>WENV183488308
OMFY01013119
322848
Bacillota
CTT
Lys
>WENV183488195
OMFY01006422
398854
Bacillota
CTC
Glu
>WENV183488214
OMFY01007065
291576
Bacillota
CCC
Gly
>WENV183488123
OMFY01004131
480324
Bacillota
TTG
Gln
>WENV183487934
OMFY01001073
497729
Bacillota
CCA
Trp
>WENV183488102
OMFY01003550
407858
Bacillota
GCC
Gly
>WENV183487699
OMFY01000200
292612
Bacillota
TAC
Val
>WENV183487642
OMFY01000107
175899
Bacillota
GTC
Asp
>WENV183487551
OMFY01000013
56079
Bacillota
AAG
Leu
>WENV183487552
OMFY01000013
56079
Bacillota
AAG
Leu
>WENV183488425
OMFY01031895
175911
Bacillota
GTC
Asp
>WENV183487546
OMFY01000008
117745
Bacillota
GTA
Tyr
>WENV183487956
OMFY01001261
280444
Bacillota
GGT
Thr
>WENV183488011
OMFY01001977
280444
Bacillota
GGT
Thr
>WENV183487613
OMFY01000072
46643
Bacillota
TGA
Ser
>WENV183487626
OMFY01000092
223045
Bacillota
GAT
Ile
>WENV183488012
OMFY01001988
179755
Bacillota
CCG
Arg
>WENV183488103
OMFY01003559
179755
Bacillota
CCG
Arg
>WENV183487529
OMFY01000001
398852
Bacillota
CTC
Glu
>WENV183487547
OMFY01000008
398852
Bacillota
CTC
Glu
>WENV183487812
OMFY01000383
398852
Bacillota
CTC
Glu
>WENV183488429
OMFY01033350
201856
Bacillota
GAT
Ile
>WENV183487649
OMFY01000107
175857
Bacillota
GTG
His
>WENV183488383
OMFY01022919
285756
Bacillota
GCC
Gly
>WENV183488220
OMFY01007122
398833
Bacillota
TGT
Thr
>WENV183487955
OMFY01001261
175849
Bacillota
GTC
Asp
>WENV183487651
OMFY01000107
280463
Bacillota
TTT
Lys
>WENV183488070
OMFY01002816
280486
Bacillota
TGC
Ala
>WENV183487951
OMFY01001251
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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