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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
93 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183492182
OMGH01003555
99852
Bacillota
GTA
Tyr
>WENV183492185
OMGH01003586
99852
Bacillota
GTA
Tyr
>WENV183492181
OMGH01003555
405363
Bacillota
GCA
Cys
>WENV183492401
OMGH01017414
280466
Bacillota
TAC
Val
>WENV183491776
OMGH01000325
280492
Bacillota
CTT
Lys
>WENV183491839
OMGH01000519
280492
Bacillota
CTT
Lys
>WENV183491894
OMGH01000775
280492
Bacillota
CTT
Lys
>WENV183492145
OMGH01002867
175842
Bacillota
CAC
Val
>WENV183491707
OMGH01000199
291629
Bacillota
CCA
Trp
>WENV183492328
OMGH01009376
179563
Bacillota
GAT
Ile
>WENV183492208
OMGH01004485
184687
Bacillota
CAT
Met
>WENV183492286
OMGH01007098
295166
Bacillota
TGC
Ala
>WENV183492327
OMGH01009376
295166
Bacillota
TGC
Ala
>WENV183492157
OMGH01003135
190476
Bacillota
CAT
Met
>WENV183492259
OMGH01005610
190476
Bacillota
CAT
Met
>WENV183492285
OMGH01007018
280447
Bacillota
GAC
Val
>WENV183492307
OMGH01008478
280447
Bacillota
GAC
Val
>WENV183492060
OMGH01001789
5692
Bacillota
GCT
Ser
>WENV183492256
OMGH01005449
5692
Bacillota
GCT
Ser
>WENV183491781
OMGH01000334
186123
Bacillota
GTC
Asp
>WENV183491945
OMGH01001001
73009
Bacillota
CAG
Leu
>WENV183492273
OMGH01006315
73009
Bacillota
CAG
Leu
>WENV183492290
OMGH01007274
291581
Bacillota
CGG
Pro
>WENV183492315
OMGH01008751
291581
Bacillota
CGG
Pro
>WENV183492206
OMGH01004480
175859
Bacillota
TCT
Arg
>WENV183492297
OMGH01007569
175859
Bacillota
TCT
Arg
>WENV183491543
OMGH01000004
284502
Bacillota
TAC
Val
>WENV183492084
OMGH01002010
175847
Bacillota
GTC
Asp
>WENV183492443
OMGH01024317
175831
Bacillota
ACG
Arg
>WENV183491691
OMGH01000172
179810
Bacillota
TCT
Arg
>WENV183491825
OMGH01000459
284627
Bacillota
GAA
Phe
>WENV183491867
OMGH01000638
284627
Bacillota
GAA
Phe
>WENV183491782
OMGH01000334
291634
Bacillota
GAA
Phe
>WENV183491830
OMGH01000481
294020
Bacillota
TAC
Val
>WENV183491860
OMGH01000633
294020
Bacillota
TAC
Val
>WENV183491862
OMGH01000633
294020
Bacillota
TAC
Val
>WENV183491908
OMGH01000810
176223
Bacillota
CAT
Met
>WENV183491971
OMGH01001192
184121
Bacillota
TGG
Pro
>WENV183491647
OMGH01000098
484885
Bacillota
TCC
Gly
>WENV183491759
OMGH01000299
480322
Bacillota
CTG
Gln
>WENV183491864
OMGH01000634
480322
Bacillota
CTG
Gln
>WENV183492289
OMGH01007274
480322
Bacillota
CTG
Gln
>WENV183492314
OMGH01008751
480322
Bacillota
CTG
Gln
>WENV183491920
OMGH01000856
175868
Bacillota
GTT
Asn
>WENV183492123
OMGH01002530
175868
Bacillota
GTT
Asn
>WENV183492287
OMGH01007180
175868
Bacillota
GTT
Asn
>WENV183492383
OMGH01013795
175868
Bacillota
GTT
Asn
>WENV183491919
OMGH01000856
398854
Bacillota
CTC
Glu
>WENV183492382
OMGH01013795
398854
Bacillota
CTC
Glu
>WENV183491796
OMGH01000369
291576
Bacillota
CCC
Gly
>WENV183492224
OMGH01004970
291576
Bacillota
CCC
Gly
>WENV183492270
OMGH01006221
291576
Bacillota
CCC
Gly
>WENV183492170
OMGH01003433
287280
Bacillota
TGT
Thr
>WENV183492102
OMGH01002213
480324
Bacillota
TTG
Gln
>WENV183492215
OMGH01004647
480324
Bacillota
TTG
Gln
>WENV183492353
OMGH01010835
480324
Bacillota
TTG
Gln
>WENV183491834
OMGH01000501
56079
Bacillota
AAG
Leu
>WENV183492214
OMGH01004609
56079
Bacillota
AAG
Leu
>WENV183492381
OMGH01013794
186051
Bacillota
GAT
Ile
>WENV183492430
OMGH01021311
398857
Bacillota
TTC
Glu
>WENV183492480
OMGH01036796
398857
Bacillota
TTC
Glu
>WENV183491702
OMGH01000193
117745
Bacillota
GTA
Tyr
>WENV183492343
OMGH01010042
280444
Bacillota
GGT
Thr
>WENV183492366
OMGH01011995
280444
Bacillota
GGT
Thr
>WENV183491918
OMGH01000854
483485
Bacillota
CCC
Gly
>WENV183492156
OMGH01003082
46643
Bacillota
TGA
Ser
>WENV183492121
OMGH01002522
179755
Bacillota
CCG
Arg
>WENV183492169
OMGH01003316
179755
Bacillota
CCG
Arg
>WENV183492447
OMGH01024778
291650
Bacillota
TGC
Ala
>WENV183492158
OMGH01003135
398832
Bacillota
TTC
Glu
>WENV183492260
OMGH01005610
398832
Bacillota
TTC
Glu
>WENV183492282
OMGH01006928
398832
Bacillota
TTC
Glu
>WENV183492335
OMGH01009731
398832
Bacillota
TTC
Glu
>WENV183491865
OMGH01000638
118669
Bacillota
GTA
Tyr
>WENV183492144
OMGH01002841
118669
Bacillota
GTA
Tyr
>WENV183491888
OMGH01000742
280462
Bacillota
GAA
Phe
>WENV183491608
OMGH01000062
398852
Bacillota
CTC
Glu
>WENV183491798
OMGH01000370
398852
Bacillota
CTC
Glu
>WENV183491823
OMGH01000439
398852
Bacillota
CTC
Glu
>WENV183492012
OMGH01001475
398852
Bacillota
CTC
Glu
>WENV183492115
OMGH01002360
289123
Bacillota
GGT
Thr
>WENV183491692
OMGH01000172
175857
Bacillota
GTG
His
>WENV183492205
OMGH01004452
398833
Bacillota
TGT
Thr
>WENV183492349
OMGH01010457
398833
Bacillota
TGT
Thr
>WENV183492342
OMGH01010042
175849
Bacillota
GTC
Asp
>WENV183491694
OMGH01000172
280463
Bacillota
TTT
Lys
>WENV183491826
OMGH01000459
280463
Bacillota
TTT
Lys
>WENV183492445
OMGH01024651
280486
Bacillota
TGC
Ala
>WENV183491717
OMGH01000212
405393
Bacillota
GCC
Gly
>WENV183492059
OMGH01001789
56074
Bacillota
TGA
Ser
>WENV183492255
OMGH01005449
56074
Bacillota
TGA
Ser
>WENV183492082
OMGH01002000
280473
Bacillota
TGG
Pro
>WENV183492146
OMGH01002882
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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