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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
47 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183492895
OMGI01001667
404076
Bacillota
GCC
Gly
>WENV183492856
OMGI01001173
184504
Bacillota
GTC
Asp
>WENV183493095
OMGI01006419
290391
Bacillota
TAC
Val
>WENV183492698
OMGI01000333
280428
Bacillota
GAA
Phe
>WENV183492738
OMGI01000485
291579
Bacillota
GAA
Phe
>WENV183492728
OMGI01000452
280492
Bacillota
CTT
Lys
>WENV183493251
OMGI01019609
175842
Bacillota
CAC
Val
>WENV183492966
OMGI01002761
184497
Bacillota
GGG
Pro
>WENV183493004
OMGI01003528
184497
Bacillota
GGG
Pro
>WENV183493194
OMGI01012087
179563
Bacillota
GAT
Ile
>WENV183492749
OMGI01000539
179176
Bacillota
ACG
Arg
>WENV183492509
OMGI01000010
312230
Bacillota
CAT
Met
>WENV183492865
OMGI01001229
404079
Bacillota
CAT
Met
>WENV183493018
OMGI01003921
73664
Bacillota
CAG
Leu
>WENV183493297
OMGI01026632
175825
Bacillota
GAT
Ile
>WENV183493296
OMGI01026632
280436
Bacillota
TGC
Ala
>WENV183492874
OMGI01001392
294020
Bacillota
TAC
Val
>WENV183492726
OMGI01000438
183957
Bacillota
CCT
Arg
>WENV183493322
OMGI01032675
346451
Bacillota
TTT
Lys
>WENV183493373
OMGI01047354
480322
Bacillota
CTG
Gln
>WENV183492565
OMGI01000040
401685
Bacillota
TTG
Gln
>WENV183493268
OMGI01021810
175868
Bacillota
GTT
Asn
>WENV183493327
OMGI01034138
291576
Bacillota
CCC
Gly
>WENV183492608
OMGI01000096
497729
Bacillota
CCA
Trp
>WENV183492897
OMGI01001671
497729
Bacillota
CCA
Trp
>WENV183492527
OMGI01000018
303718
Bacillota
TGT
Thr
>WENV183492877
OMGI01001403
303718
Bacillota
TGT
Thr
>WENV183493359
OMGI01042720
175911
Bacillota
GTC
Asp
>WENV183493314
OMGI01030509
292374
Bacillota
TGC
Ala
>WENV183493306
OMGI01029174
186051
Bacillota
GAT
Ile
>WENV183492959
OMGI01002689
398857
Bacillota
TTC
Glu
>WENV183493203
OMGI01012602
117745
Bacillota
GTA
Tyr
>WENV183493303
OMGI01028643
280444
Bacillota
GGT
Thr
>WENV183492706
OMGI01000366
58120
Bacillota
AAG
Leu
>WENV183492904
OMGI01001816
46835
Bacillota
TAA
Leu
>WENV183492702
OMGI01000344
330413
Bacillota
CTT
Lys
>WENV183492883
OMGI01001476
330413
Bacillota
CTT
Lys
>WENV183492788
OMGI01000745
398832
Bacillota
TTC
Glu
>WENV183492604
OMGI01000092
175915
Bacillota
GTC
Asp
>WENV183492524
OMGI01000016
280476
Bacillota
TTT
Lys
>WENV183493062
OMGI01005120
280462
Bacillota
GAA
Phe
>WENV183492830
OMGI01000986
398852
Bacillota
CTC
Glu
>WENV183492860
OMGI01001193
398852
Bacillota
CTC
Glu
>WENV183493313
OMGI01030509
201856
Bacillota
GAT
Ile
>WENV183492564
OMGI01000040
175857
Bacillota
GTG
His
>WENV183492521
OMGI01000016
179166
Bacillota
TCT
Arg
>WENV183492844
OMGI01001109
482078
Bacillota
CCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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