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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
80 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183494099
OMGK01000006
510477
Bacillota
TCC
Gly
>WENV183494682
OMGK01006242
99852
Bacillota
GTA
Tyr
>WENV183494343
OMGK01000666
343590
Bacillota
GCC
Gly
>WENV183494888
OMGK01025653
280500
Bacillota
TGC
Ala
>WENV183494919
OMGK01033156
405363
Bacillota
GCA
Cys
>WENV183494605
OMGK01003904
291579
Bacillota
GAA
Phe
>WENV183494355
OMGK01000728
229015
Bacillota
GTG
His
>WENV183494910
OMGK01029893
175842
Bacillota
CAC
Val
>WENV183494412
OMGK01001104
291629
Bacillota
CCA
Trp
>WENV183494729
OMGK01008757
236579
Bacillota
GAT
Ile
>WENV183494832
OMGK01016881
194260
Bacillota
GAT
Ile
>WENV183494728
OMGK01008757
295166
Bacillota
TGC
Ala
>WENV183494594
OMGK01003697
73664
Bacillota
CAG
Leu
>WENV183494566
OMGK01002812
280447
Bacillota
GAC
Val
>WENV183494740
OMGK01009422
280447
Bacillota
GAC
Val
>WENV183494216
OMGK01000212
5692
Bacillota
GCT
Ser
>WENV183494693
OMGK01006772
5692
Bacillota
GCT
Ser
>WENV183494697
OMGK01006918
5692
Bacillota
GCT
Ser
>WENV183494759
OMGK01010999
5692
Bacillota
GCT
Ser
>WENV183494108
OMGK01000017
312274
Bacillota
GGC
Ala
>WENV183494169
OMGK01000116
186123
Bacillota
GTC
Asp
>WENV183494533
OMGK01002226
284723
Bacillota
TAC
Val
>WENV183494660
OMGK01005416
73009
Bacillota
CAG
Leu
>WENV183494834
OMGK01017062
291581
Bacillota
CGG
Pro
>WENV183494562
OMGK01002756
291581
Bacillota
CGG
Pro
>WENV183494649
OMGK01005004
175859
Bacillota
TCT
Arg
>WENV183494453
OMGK01001461
175831
Bacillota
ACG
Arg
>WENV183494288
OMGK01000444
332181
Bacillota
TGT
Thr
>WENV183494354
OMGK01000728
179810
Bacillota
TCT
Arg
>WENV183494170
OMGK01000116
291634
Bacillota
GAA
Phe
>WENV183494113
OMGK01000029
346451
Bacillota
TTT
Lys
>WENV183494546
OMGK01002424
27216
Bacillota
GCT
Ser
>WENV183494847
OMGK01017964
27216
Bacillota
GCT
Ser
>WENV183494550
OMGK01002458
480322
Bacillota
CTG
Gln
>WENV183494561
OMGK01002756
480322
Bacillota
CTG
Gln
>WENV183494686
OMGK01006372
480322
Bacillota
CTG
Gln
>WENV183494724
OMGK01008290
480322
Bacillota
CTG
Gln
>WENV183494792
OMGK01013294
480322
Bacillota
CTG
Gln
>WENV183494597
OMGK01003804
175868
Bacillota
GTT
Asn
>WENV183494600
OMGK01003838
175868
Bacillota
GTT
Asn
>WENV183494672
OMGK01005757
175868
Bacillota
GTT
Asn
>WENV183494691
OMGK01006652
175868
Bacillota
GTT
Asn
>WENV183494961
OMGK01047319
314834
Bacillota
TGC
Ala
>WENV183494599
OMGK01003838
398854
Bacillota
CTC
Glu
>WENV183494671
OMGK01005757
398854
Bacillota
CTC
Glu
>WENV183494690
OMGK01006652
398854
Bacillota
CTC
Glu
>WENV183494518
OMGK01002009
291576
Bacillota
CCC
Gly
>WENV183494647
OMGK01004953
291576
Bacillota
CCC
Gly
>WENV183494752
OMGK01010828
291576
Bacillota
CCC
Gly
>WENV183494383
OMGK01000885
480324
Bacillota
TTG
Gln
>WENV183494721
OMGK01008037
480324
Bacillota
TTG
Gln
>WENV183494252
OMGK01000318
497729
Bacillota
CCA
Trp
>WENV183494624
OMGK01004563
303718
Bacillota
TGT
Thr
>WENV183494811
OMGK01015078
56079
Bacillota
AAG
Leu
>WENV183494880
OMGK01023951
186051
Bacillota
GAT
Ile
>WENV183494578
OMGK01003044
117745
Bacillota
GTA
Tyr
>WENV183494380
OMGK01000871
483485
Bacillota
CCC
Gly
>WENV183494717
OMGK01007944
46643
Bacillota
TGA
Ser
>WENV183494610
OMGK01004053
179755
Bacillota
CCG
Arg
>WENV183494849
OMGK01018277
46835
Bacillota
TAA
Leu
>WENV183494500
OMGK01001953
398832
Bacillota
TTC
Glu
>WENV183494719
OMGK01007964
398832
Bacillota
TTC
Glu
>WENV183494959
OMGK01045731
25955
Bacillota
GCT
Ser
>WENV183494157
OMGK01000097
118669
Bacillota
GTA
Tyr
>WENV183494437
OMGK01001356
118669
Bacillota
GTA
Tyr
>WENV183494743
OMGK01009679
52748
Bacillota
TGA
Ser
>WENV183494524
OMGK01002073
280462
Bacillota
GAA
Phe
>WENV183494233
OMGK01000256
398852
Bacillota
CTC
Glu
>WENV183494234
OMGK01000256
398852
Bacillota
CTC
Glu
>WENV183494235
OMGK01000256
398852
Bacillota
CTC
Glu
>WENV183494817
OMGK01015756
398852
Bacillota
CTC
Glu
>WENV183494291
OMGK01000444
289123
Bacillota
GGT
Thr
>WENV183494694
OMGK01006805
285756
Bacillota
GCC
Gly
>WENV183494786
OMGK01012796
398833
Bacillota
TGT
Thr
>WENV183494760
OMGK01011104
516671
Bacillota
TCC
Gly
>WENV183494127
OMGK01000047
405393
Bacillota
GCC
Gly
>WENV183494696
OMGK01006918
56074
Bacillota
TGA
Ser
>WENV183494758
OMGK01010999
56074
Bacillota
TGA
Ser
>WENV183494449
OMGK01001420
280473
Bacillota
TGG
Pro
>WENV183494543
OMGK01002318
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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