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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
83 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183495112
OMGL01000123
99852
Bacillota
GTA
Tyr
>WENV183495619
OMGL01004925
99852
Bacillota
GTA
Tyr
>WENV183495398
OMGL01001379
343590
Bacillota
GCC
Gly
>WENV183495110
OMGL01000123
349107
Bacillota
GCC
Gly
>WENV183495137
OMGL01000178
349107
Bacillota
GCC
Gly
>WENV183495111
OMGL01000123
405363
Bacillota
GCA
Cys
>WENV183495136
OMGL01000178
280428
Bacillota
GAA
Phe
>WENV183495759
OMGL01011370
141454
Bacillota
TAG
Leu
>WENV183495753
OMGL01011370
480359
Bacillota
TCC
Gly
>WENV183495538
OMGL01003181
179917
Bacillota
CAT
Met
>WENV183495003
OMGL01000013
280492
Bacillota
CTT
Lys
>WENV183495125
OMGL01000166
280492
Bacillota
CTT
Lys
>WENV183495757
OMGL01011370
418726
Bacillota
TGT
Thr
>WENV183495762
OMGL01011370
280642
Bacillota
TTG
Gln
>WENV183495390
OMGL01001335
175842
Bacillota
CAC
Val
>WENV183495763
OMGL01011370
280639
Bacillota
TTT
Lys
>WENV183495600
OMGL01004515
348419
Bacillota
GTT
Asn
>WENV183495754
OMGL01011370
298270
Bacillota
TAC
Val
>WENV183495847
OMGL01017861
179563
Bacillota
GAT
Ile
>WENV183495917
OMGL01034114
179176
Bacillota
ACG
Arg
>WENV183495199
OMGL01000340
190476
Bacillota
CAT
Met
>WENV183495761
OMGL01011370
176014
Bacillota
TCT
Arg
>WENV183495760
OMGL01011370
398916
Bacillota
>WENV183495287
OMGL01000679
280447
Bacillota
GAC
Val
>WENV183495476
OMGL01002134
280447
Bacillota
GAC
Val
>WENV183495513
OMGL01002775
5692
Bacillota
GCT
Ser
>WENV183495725
OMGL01009241
312274
Bacillota
GGC
Ala
>WENV183495565
OMGL01003559
186123
Bacillota
GTC
Asp
>WENV183495924
OMGL01037078
175825
Bacillota
GAT
Ile
>WENV183495355
OMGL01001018
284723
Bacillota
TAC
Val
>WENV183495106
OMGL01000123
73009
Bacillota
CAG
Leu
>WENV183495214
OMGL01000384
73009
Bacillota
CAG
Leu
>WENV183495412
OMGL01001473
291581
Bacillota
CGG
Pro
>WENV183495395
OMGL01001364
175859
Bacillota
TCT
Arg
>WENV183495923
OMGL01037078
280436
Bacillota
TGC
Ala
>WENV183495756
OMGL01011370
280641
Bacillota
GTT
Asn
>WENV183495588
OMGL01004141
175831
Bacillota
ACG
Arg
>WENV183495664
OMGL01006552
332181
Bacillota
TGT
Thr
>WENV183495163
OMGL01000258
284627
Bacillota
GAA
Phe
>WENV183495566
OMGL01003559
291634
Bacillota
GAA
Phe
>WENV183495929
OMGL01038306
195824
Bacillota
GAT
Ile
>WENV183495411
OMGL01001473
480322
Bacillota
CTG
Gln
>WENV183495603
OMGL01004517
480322
Bacillota
CTG
Gln
>WENV183495278
OMGL01000616
175868
Bacillota
GTT
Asn
>WENV183495563
OMGL01003475
100097
Bacillota
GTA
Tyr
>WENV183495277
OMGL01000616
398854
Bacillota
CTC
Glu
>WENV183495206
OMGL01000356
291576
Bacillota
CCC
Gly
>WENV183495410
OMGL01001473
480324
Bacillota
TTG
Gln
>WENV183495980
OMGL01055115
480324
Bacillota
TTG
Gln
>WENV183495711
OMGL01008734
175899
Bacillota
GTC
Asp
>WENV183495964
OMGL01050908
303718
Bacillota
TGT
Thr
>WENV183495092
OMGL01000103
56079
Bacillota
AAG
Leu
>WENV183495594
OMGL01004357
56079
Bacillota
AAG
Leu
>WENV183495736
OMGL01010698
323864
Bacillota
TGC
Ala
>WENV183495747
OMGL01011280
186051
Bacillota
GAT
Ile
>WENV183495601
OMGL01004515
398857
Bacillota
TTC
Glu
>WENV183495215
OMGL01000388
117745
Bacillota
GTA
Tyr
>WENV183495807
OMGL01014345
117745
Bacillota
GTA
Tyr
>WENV183495425
OMGL01001567
280444
Bacillota
GGT
Thr
>WENV183495025
OMGL01000028
46643
Bacillota
TGA
Ser
>WENV183495201
OMGL01000340
179755
Bacillota
CCG
Arg
>WENV183495223
OMGL01000412
46835
Bacillota
TAA
Leu
>WENV183495200
OMGL01000340
398832
Bacillota
TTC
Glu
>WENV183495369
OMGL01001106
25955
Bacillota
GCT
Ser
>WENV183495562
OMGL01003475
282754
Bacillota
TGT
Thr
>WENV183495948
OMGL01043608
283367
Bacillota
GCC
Gly
>WENV183495022
OMGL01000028
280462
Bacillota
GAA
Phe
>WENV183495809
OMGL01014345
280462
Bacillota
GAA
Phe
>WENV183495128
OMGL01000172
398852
Bacillota
CTC
Glu
>WENV183495209
OMGL01000372
398852
Bacillota
CTC
Glu
>WENV183495037
OMGL01000050
398852
Bacillota
CTC
Glu
>WENV183495579
OMGL01003970
298260
Bacillota
GTT
Asn
>WENV183495060
OMGL01000066
175857
Bacillota
GTG
His
>WENV183495879
OMGL01025636
285756
Bacillota
GCC
Gly
>WENV183495646
OMGL01005994
398833
Bacillota
TGT
Thr
>WENV183495109
OMGL01000123
175849
Bacillota
GTC
Asp
>WENV183495062
OMGL01000066
280463
Bacillota
TTT
Lys
>WENV183495810
OMGL01014345
280463
Bacillota
TTT
Lys
>WENV183495896
OMGL01028301
280486
Bacillota
TGC
Ala
>WENV183495497
OMGL01002421
405393
Bacillota
GCC
Gly
>WENV183495512
OMGL01002775
56074
Bacillota
TGA
Ser
>WENV183495752
OMGL01011370
443965
Bacillota
>WENV183495419
OMGL01001543
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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