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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
60 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183496831
OMGM01035531
343590
Bacillota
GCC
Gly
>WENV183496570
OMGM01004283
234991
Bacillota
GAT
Ile
>WENV183496507
OMGM01002300
405363
Bacillota
GCA
Cys
>WENV183496401
OMGM01000953
280428
Bacillota
GAA
Phe
>WENV183496596
OMGM01005971
291579
Bacillota
GAA
Phe
>WENV183496779
OMGM01024939
280492
Bacillota
CTT
Lys
>WENV183496147
OMGM01000074
175842
Bacillota
CAC
Val
>WENV183496536
OMGM01002896
175842
Bacillota
CAC
Val
>WENV183496593
OMGM01005713
291629
Bacillota
CCA
Trp
>WENV183496821
OMGM01033639
184497
Bacillota
GGG
Pro
>WENV183496629
OMGM01008039
179563
Bacillota
GAT
Ile
>WENV183496571
OMGM01004283
295166
Bacillota
TGC
Ala
>WENV183496628
OMGM01008039
295166
Bacillota
TGC
Ala
>WENV183496572
OMGM01004317
190476
Bacillota
CAT
Met
>WENV183496069
OMGM01000019
73664
Bacillota
CAG
Leu
>WENV183496258
OMGM01000285
280447
Bacillota
GAC
Val
>WENV183496381
OMGM01000764
280447
Bacillota
GAC
Val
>WENV183496677
OMGM01011668
280447
Bacillota
GAC
Val
>WENV183496832
OMGM01036122
186123
Bacillota
GTC
Asp
>WENV183496859
OMGM01045009
175825
Bacillota
GAT
Ile
>WENV183496434
OMGM01001360
73009
Bacillota
CAG
Leu
>WENV183496269
OMGM01000304
175859
Bacillota
TCT
Arg
>WENV183496858
OMGM01045009
280436
Bacillota
TGC
Ala
>WENV183496601
OMGM01006329
175831
Bacillota
ACG
Arg
>WENV183496124
OMGM01000051
179810
Bacillota
TCT
Arg
>WENV183496558
OMGM01003877
346451
Bacillota
TTT
Lys
>WENV183496214
OMGM01000169
480322
Bacillota
CTG
Gln
>WENV183496170
OMGM01000098
175868
Bacillota
GTT
Asn
>WENV183496400
OMGM01000850
175868
Bacillota
GTT
Asn
>WENV183496406
OMGM01001010
175868
Bacillota
GTT
Asn
>WENV183496398
OMGM01000850
322848
Bacillota
CTT
Lys
>WENV183496399
OMGM01000850
398854
Bacillota
CTC
Glu
>WENV183496405
OMGM01001010
398854
Bacillota
CTC
Glu
>WENV183496664
OMGM01010631
291576
Bacillota
CCC
Gly
>WENV183496508
OMGM01002300
480324
Bacillota
TTG
Gln
>WENV183496383
OMGM01000779
497729
Bacillota
CCA
Trp
>WENV183496204
OMGM01000140
303718
Bacillota
TGT
Thr
>WENV183496775
OMGM01023417
186051
Bacillota
GAT
Ile
>WENV183496729
OMGM01016365
117745
Bacillota
GTA
Tyr
>WENV183496325
OMGM01000471
280444
Bacillota
GGT
Thr
>WENV183496327
OMGM01000471
280444
Bacillota
GGT
Thr
>WENV183496499
OMGM01002094
179755
Bacillota
CCG
Arg
>WENV183496814
OMGM01031780
46835
Bacillota
TAA
Leu
>WENV183496573
OMGM01004317
398832
Bacillota
TTC
Glu
>WENV183496528
OMGM01002777
118669
Bacillota
GTA
Tyr
>WENV183496813
OMGM01031780
175915
Bacillota
GTC
Asp
>WENV183496723
OMGM01015701
280462
Bacillota
GAA
Phe
>WENV183496472
OMGM01001834
398852
Bacillota
CTC
Glu
>WENV183496473
OMGM01001834
398852
Bacillota
CTC
Glu
>WENV183496474
OMGM01001834
398852
Bacillota
CTC
Glu
>WENV183496833
OMGM01036472
201856
Bacillota
GAT
Ile
>WENV183496840
OMGM01038158
298260
Bacillota
GTT
Asn
>WENV183496125
OMGM01000051
175857
Bacillota
GTG
His
>WENV183496063
OMGM01000015
285756
Bacillota
GCC
Gly
>WENV183496428
OMGM01001271
398833
Bacillota
TGT
Thr
>WENV183496326
OMGM01000471
175849
Bacillota
GTC
Asp
>WENV183496610
OMGM01006843
317820
Bacillota
TAC
Val
>WENV183496591
OMGM01005525
405393
Bacillota
GCC
Gly
>WENV183496259
OMGM01000285
56074
Bacillota
TGA
Ser
>WENV183496757
OMGM01019956
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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