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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
50 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183501090
OMGR01008460
99852
Bacillota
GTA
Tyr
>WENV183500707
OMGR01000104
356775
Bacillota
TGT
Thr
>WENV183500976
OMGR01002257
349107
Bacillota
GCC
Gly
>WENV183500978
OMGR01002257
349107
Bacillota
GCC
Gly
>WENV183501056
OMGR01005524
349107
Bacillota
GCC
Gly
>WENV183501060
OMGR01005524
349107
Bacillota
GCC
Gly
>WENV183500979
OMGR01002257
405363
Bacillota
GCA
Cys
>WENV183500920
OMGR01001205
280428
Bacillota
GAA
Phe
>WENV183500975
OMGR01002257
280428
Bacillota
GAA
Phe
>WENV183501059
OMGR01005524
280428
Bacillota
GAA
Phe
>WENV183500966
OMGR01002189
229015
Bacillota
GTG
His
>WENV183501057
OMGR01005524
280466
Bacillota
TAC
Val
>WENV183501094
OMGR01009076
175842
Bacillota
CAC
Val
>WENV183500963
OMGR01002104
179176
Bacillota
ACG
Arg
>WENV183501035
OMGR01004380
280447
Bacillota
GAC
Val
>WENV183500913
OMGR01001157
73009
Bacillota
CAG
Leu
>WENV183500927
OMGR01001388
73009
Bacillota
CAG
Leu
>WENV183500988
OMGR01002581
73009
Bacillota
CAG
Leu
>WENV183500999
OMGR01003160
73009
Bacillota
CAG
Leu
>WENV183501013
OMGR01003632
291581
Bacillota
CGG
Pro
>WENV183500933
OMGR01001485
175859
Bacillota
TCT
Arg
>WENV183501015
OMGR01003887
175831
Bacillota
ACG
Arg
>WENV183501081
OMGR01007226
295350
Bacillota
TGC
Ala
>WENV183500939
OMGR01001631
480322
Bacillota
CTG
Gln
>WENV183501012
OMGR01003632
480322
Bacillota
CTG
Gln
>WENV183501020
OMGR01004020
401685
Bacillota
TTG
Gln
>WENV183501207
OMGR01028500
175868
Bacillota
GTT
Asn
>WENV183501177
OMGR01019091
322848
Bacillota
CTT
Lys
>WENV183501187
OMGR01022039
291576
Bacillota
CCC
Gly
>WENV183500886
OMGR01001002
480324
Bacillota
TTG
Gln
>WENV183501206
OMGR01026956
497729
Bacillota
CCA
Trp
>WENV183501214
OMGR01029441
73638
Bacillota
AAG
Leu
>WENV183501185
OMGR01021151
323864
Bacillota
TGC
Ala
>WENV183500883
OMGR01000954
398857
Bacillota
TTC
Glu
>WENV183501201
OMGR01026000
280444
Bacillota
GGT
Thr
>WENV183501083
OMGR01007287
342104
Bacillota
TAC
Val
>WENV183500987
OMGR01002527
179755
Bacillota
CCG
Arg
>WENV183501027
OMGR01004116
179755
Bacillota
CCG
Arg
>WENV183500973
OMGR01002217
58120
Bacillota
AAG
Leu
>WENV183501151
OMGR01015346
46835
Bacillota
TAA
Leu
>WENV183500968
OMGR01002189
280476
Bacillota
TTT
Lys
>WENV183501021
OMGR01004020
309916
Bacillota
TTT
Lys
>WENV183501109
OMGR01010294
321248
Bacillota
TAC
Val
>WENV183501019
OMGR01004020
175857
Bacillota
GTG
His
>WENV183500863
OMGR01000760
398833
Bacillota
TGT
Thr
>WENV183501107
OMGR01010257
398833
Bacillota
TGT
Thr
>WENV183500977
OMGR01002257
175849
Bacillota
GTC
Asp
>WENV183501058
OMGR01005524
175849
Bacillota
GTC
Asp
>WENV183501011
OMGR01003476
280473
Bacillota
TGG
Pro
>WENV183501071
OMGR01006424
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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