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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
54 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183501999
OMGS01023877
377363
Bacillota
GAA
Phe
>WENV183501650
OMGS01002552
404076
Bacillota
GCC
Gly
>WENV183502008
OMGS01024887
280500
Bacillota
TGC
Ala
>WENV183502133
OMGS01048696
480520
Bacillota
TCC
Gly
>WENV183501648
OMGS01002552
184504
Bacillota
GTC
Asp
>WENV183502003
OMGS01024084
282753
Bacillota
TAC
Val
>WENV183502073
OMGS01035370
400111
Bacillota
GTT
Asn
>WENV183501699
OMGS01004037
229015
Bacillota
GTG
His
>WENV183502004
OMGS01024084
176678
Bacillota
GTC
Asp
>WENV183501978
OMGS01021348
284011
Bacillota
TAC
Val
>WENV183501864
OMGS01012500
289717
Bacillota
CTT
Lys
>WENV183501943
OMGS01018426
176018
Bacillota
CAT
Met
>WENV183502151
OMGS01052217
405874
Bacillota
TTC
Glu
>WENV183501934
OMGS01018071
376224
Bacillota
TGG
Pro
>WENV183501877
OMGS01012930
282752
Bacillota
TTT
Lys
>WENV183501596
OMGS01001020
406553
Bacillota
TTG
Gln
>WENV183502131
OMGS01048696
141334
Bacillota
TAG
Leu
>WENV183501989
OMGS01021809
11172
Bacillota
TGA
Ser
>WENV183502161
OMGS01055384
175825
Bacillota
GAT
Ile
>WENV183502152
OMGS01052217
287643
Bacillota
TAC
Val
>WENV183502054
OMGS01032591
481217
Bacillota
GCA
Cys
>WENV183501958
OMGS01020153
452735
Bacillota
GCC
Gly
>WENV183501714
OMGS01004767
399266
Bacillota
>WENV183501641
OMGS01002234
280646
Bacillota
TGC
Ala
>WENV183501690
OMGS01003745
407726
Bacillota
CTG
Gln
>WENV183502128
OMGS01048696
330433
Bacillota
GTG
His
>WENV183501931
OMGS01018071
400112
Bacillota
GCC
Gly
>WENV183501959
OMGS01020153
289147
Bacillota
GTT
Asn
>WENV183502016
OMGS01026043
400041
Bacillota
CCG
Arg
>WENV183502060
OMGS01033409
29614
Bacillota
GGA
Ser
>WENV183501932
OMGS01018071
480905
Bacillota
TCC
Gly
>WENV183501691
OMGS01003790
295350
Bacillota
TGC
Ala
>WENV183501983
OMGS01021809
459288
Bacillota
GCC
Gly
>WENV183501977
OMGS01021348
100097
Bacillota
GTA
Tyr
>WENV183501921
OMGS01016974
48832
Bacillota
TAA
Leu
>WENV183502145
OMGS01050958
120213
Bacillota
GTA
Tyr
>WENV183502045
OMGS01030842
497729
Bacillota
CCA
Trp
>WENV183501805
OMGS01008155
303718
Bacillota
TGT
Thr
>WENV183501797
OMGS01007977
73638
Bacillota
AAG
Leu
>WENV183502012
OMGS01025056
292374
Bacillota
TGC
Ala
>WENV183502130
OMGS01048696
354380
Bacillota
TTT
Lys
>WENV183502172
OMGS01060036
208022
Bacillota
ACG
Arg
>WENV183501672
OMGS01003117
46835
Bacillota
TAA
Leu
>WENV183501933
OMGS01018071
176771
Bacillota
TCT
Arg
>WENV183502127
OMGS01048696
203851
Bacillota
TCT
Arg
>WENV183502002
OMGS01024084
449573
Bacillota
>WENV183501976
OMGS01021348
282754
Bacillota
TGT
Thr
>WENV183502011
OMGS01025056
201856
Bacillota
GAT
Ile
>WENV183501981
OMGS01021809
118370
Bacillota
TAG
Leu
>WENV183502098
OMGS01040479
444984
Bacillota
GCC
Gly
>WENV183502117
OMGS01045633
403766
Bacillota
TTG
Gln
>WENV183501920
OMGS01016974
489283
Bacillota
GCA
Cys
>WENV183501865
OMGS01012514
280486
Bacillota
TGC
Ala
>WENV183502037
OMGS01028664
482078
Bacillota
CCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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