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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
115 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183502821
OMGU01000025
338143
Bacillota
CTC
Glu
>WENV183502827
OMGU01000028
338143
Bacillota
CTC
Glu
>WENV183502842
OMGU01000038
144672
Bacillota
TCT
Arg
>WENV183502848
OMGU01000042
344240
Bacillota
GCC
Gly
>WENV183502859
OMGU01000053
202812
Bacillota
CAT
Met
>WENV183502862
OMGU01000055
344240
Bacillota
GCC
Gly
>WENV183502867
OMGU01000056
277200
Bacillota
GGC
Ala
>WENV183502879
OMGU01000065
44854
Bacillota
TGA
Ser
>WENV183502880
OMGU01000065
4624
Bacillota
GCT
Ser
>WENV183502878
OMGU01000065
235095
Bacillota
GGT
Thr
>WENV183502881
OMGU01000066
338129
Bacillota
TGT
Thr
>WENV183502893
OMGU01000079
235098
Bacillota
GAC
Val
>WENV183502892
OMGU01000079
144594
Bacillota
CAC
Val
>WENV183502946
OMGU01000132
59296
Bacillota
AAG
Leu
>WENV183502944
OMGU01000132
59296
Bacillota
AAG
Leu
>WENV183502964
OMGU01000164
411547
Bacillota
CTG
Gln
>WENV183502990
OMGU01000202
144621
Bacillota
GTT
Asn
>WENV183502995
OMGU01000209
148188
Bacillota
CCG
Arg
>WENV183502994
OMGU01000209
338128
Bacillota
TTC
Glu
>WENV183503003
OMGU01000213
248965
Bacillota
GCC
Gly
>WENV183503028
OMGU01000266
309417
Bacillota
GGC
Ala
>WENV183503027
OMGU01000266
144621
Bacillota
GTT
Asn
>WENV183503061
OMGU01000332
11034
Bacillota
GGA
Ser
>WENV183503060
OMGU01000332
80612
Bacillota
GTA
Tyr
>WENV183503059
OMGU01000332
338129
Bacillota
TGT
Thr
>WENV183503077
OMGU01000360
413152
Bacillota
TCC
Gly
>WENV183503112
OMGU01000408
245298
Bacillota
CGG
Pro
>WENV183503111
OMGU01000408
411547
Bacillota
CTG
Gln
>WENV183503113
OMGU01000408
235124
Bacillota
TGG
Pro
>WENV183503138
OMGU01000463
338131
Bacillota
GCC
Gly
>WENV183503140
OMGU01000471
309417
Bacillota
GGC
Ala
>WENV183503141
OMGU01000471
411549
Bacillota
TTG
Gln
>WENV183503172
OMGU01000563
18852
Bacillota
GCT
Ser
>WENV183503178
OMGU01000569
196632
Bacillota
GTC
Asp
>WENV183503179
OMGU01000569
245344
Bacillota
GAA
Phe
>WENV183503193
OMGU01000603
196621
Bacillota
GTC
Asp
>WENV183503194
OMGU01000603
235095
Bacillota
GGT
Thr
>WENV183503192
OMGU01000603
235095
Bacillota
GGT
Thr
>WENV183503220
OMGU01000699
429443
Bacillota
GCA
Cys
>WENV183503221
OMGU01000702
338147
Bacillota
CTC
Glu
>WENV183503238
OMGU01000763
144612
Bacillota
TCT
Arg
>WENV183503240
OMGU01000763
58712
Bacillota
CAG
Leu
>WENV183503245
OMGU01000772
58712
Bacillota
CAG
Leu
>WENV183503246
OMGU01000774
144612
Bacillota
TCT
Arg
>WENV183503268
OMGU01000821
58712
Bacillota
CAG
Leu
>WENV183503269
OMGU01000822
147684
Bacillota
ACG
Arg
>WENV183503280
OMGU01000861
44854
Bacillota
TGA
Ser
>WENV183503281
OMGU01000861
4624
Bacillota
GCT
Ser
>WENV183503284
OMGU01000878
419639
Bacillota
GCA
Cys
>WENV183503288
OMGU01000897
37269
Bacillota
TGA
Ser
>WENV183503289
OMGU01000897
10680
Bacillota
GGA
Ser
>WENV183503302
OMGU01000925
235114
Bacillota
TTT
Lys
>WENV183503300
OMGU01000925
144610
Bacillota
GTG
His
>WENV183503318
OMGU01000964
267649
Bacillota
TAC
Val
>WENV183503315
OMGU01000964
235154
Bacillota
GTT
Asn
>WENV183503317
OMGU01000964
198770
Bacillota
GTC
Asp
>WENV183503319
OMGU01000964
185292
Bacillota
ACG
Arg
>WENV183503355
OMGU01001084
267649
Bacillota
TAC
Val
>WENV183503361
OMGU01001096
338128
Bacillota
TTC
Glu
>WENV183503365
OMGU01001099
313164
Bacillota
TTT
Lys
>WENV183503389
OMGU01001219
162445
Bacillota
CAT
Met
>WENV183503396
OMGU01001252
235124
Bacillota
TGG
Pro
>WENV183503414
OMGU01001347
411547
Bacillota
CTG
Gln
>WENV183503416
OMGU01001361
411549
Bacillota
TTG
Gln
>WENV183503417
OMGU01001372
144594
Bacillota
CAC
Val
>WENV183503418
OMGU01001387
235171
Bacillota
CCA
Trp
>WENV183503432
OMGU01001478
338147
Bacillota
CTC
Glu
>WENV183503431
OMGU01001478
338147
Bacillota
CTC
Glu
>WENV183503440
OMGU01001539
59312
Bacillota
CAG
Leu
>WENV183503439
OMGU01001539
44859
Bacillota
AAG
Leu
>WENV183503448
OMGU01001576
241441
Bacillota
GCC
Gly
>WENV183503472
OMGU01001707
338147
Bacillota
CTC
Glu
>WENV183503481
OMGU01001827
202812
Bacillota
CAT
Met
>WENV183503492
OMGU01001893
37213
Bacillota
TGA
Ser
>WENV183503502
OMGU01001977
235127
Bacillota
TTT
Lys
>WENV183503512
OMGU01002070
148188
Bacillota
CCG
Arg
>WENV183503527
OMGU01002147
243098
Bacillota
GGT
Thr
>WENV183503541
OMGU01002206
245296
Bacillota
CCC
Gly
>WENV183503549
OMGU01002250
338149
Bacillota
CTC
Glu
>WENV183503550
OMGU01002250
144621
Bacillota
GTT
Asn
>WENV183503551
OMGU01002254
37269
Bacillota
TGA
Ser
>WENV183503572
OMGU01002493
80612
Bacillota
GTA
Tyr
>WENV183503571
OMGU01002493
58712
Bacillota
CAG
Leu
>WENV183503606
OMGU01003003
248965
Bacillota
GCC
Gly
>WENV183503612
OMGU01003161
157838
Bacillota
GTC
Asp
>WENV183503615
OMGU01003192
307003
Bacillota
TGC
Ala
>WENV183503646
OMGU01003903
338149
Bacillota
CTC
Glu
>WENV183503647
OMGU01003903
144621
Bacillota
GTT
Asn
>WENV183503664
OMGU01004301
341763
Bacillota
CTC
Glu
>WENV183503665
OMGU01004312
235142
Bacillota
CTT
Lys
>WENV183503667
OMGU01004325
41154
Bacillota
TAA
Leu
>WENV183503676
OMGU01004635
95563
Bacillota
GTA
Tyr
>WENV183503683
OMGU01004822
412387
Bacillota
GCA
Cys
>WENV183503685
OMGU01004954
235142
Bacillota
CTT
Lys
>WENV183503699
OMGU01005264
429429
Bacillota
CCA
Trp
>WENV183503725
OMGU01006774
339890
Bacillota
TTG
Gln
>WENV183503726
OMGU01006774
235127
Bacillota
TTT
Lys
>WENV183503723
OMGU01006774
147674
Bacillota
TCT
Arg
>WENV183503739
OMGU01007071
338152
Bacillota
TTC
Glu
>WENV183503738
OMGU01007071
287000
Bacillota
GTT
Asn
>WENV183503753
OMGU01008103
246023
Bacillota
TGC
Ala
>WENV183503755
OMGU01008333
238910
Bacillota
CTT
Lys
>WENV183503776
OMGU01009808
152492
Bacillota
GGG
Pro
>WENV183503835
OMGU01021270
241432
Bacillota
TGT
Thr
>WENV183503849
OMGU01025580
238910
Bacillota
CTT
Lys
>WENV183503859
OMGU01027018
379268
Bacillota
TTC
Glu
>WENV183503864
OMGU01027018
392638
Bacillota
TGT
Thr
>WENV183503860
OMGU01027018
411584
Bacillota
TCC
Gly
>WENV183503861
OMGU01027018
313104
Bacillota
TAC
Val
>WENV183503863
OMGU01027018
235289
Bacillota
GTT
Asn
>WENV183503872
OMGU01029435
316443
Bacillota
GTC
Asp
>WENV183503874
OMGU01029435
109476
Bacillota
TAG
Leu
>WENV183503886
OMGU01031339
414486
Bacillota
CCC
Gly
>WENV183503893
OMGU01033707
338143
Bacillota
CTC
Glu
>WENV183503898
OMGU01037092
144767
Bacillota
GTG
His
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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