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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
60 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183504164
OMGV01000457
404076
Bacillota
GCC
Gly
>WENV183504134
OMGV01000334
349107
Bacillota
GCC
Gly
>WENV183504162
OMGV01000450
184504
Bacillota
GTC
Asp
>WENV183504247
OMGV01000857
284746
Bacillota
CTG
Gln
>WENV183504091
OMGV01000254
280492
Bacillota
CTT
Lys
>WENV183504368
OMGV01002655
175842
Bacillota
CAC
Val
>WENV183504003
OMGV01000053
348419
Bacillota
GTT
Asn
>WENV183504438
OMGV01006348
179176
Bacillota
ACG
Arg
>WENV183504094
OMGV01000258
295166
Bacillota
TGC
Ala
>WENV183504230
OMGV01000764
404079
Bacillota
CAT
Met
>WENV183504178
OMGV01000535
190476
Bacillota
CAT
Met
>WENV183504191
OMGV01000596
73664
Bacillota
CAG
Leu
>WENV183504359
OMGV01002451
280447
Bacillota
GAC
Val
>WENV183504321
OMGV01001664
5692
Bacillota
GCT
Ser
>WENV183504075
OMGV01000191
186123
Bacillota
GTC
Asp
>WENV183504351
OMGV01002161
73009
Bacillota
CAG
Leu
>WENV183504310
OMGV01001476
291581
Bacillota
CGG
Pro
>WENV183504332
OMGV01001881
175859
Bacillota
TCT
Arg
>WENV183504165
OMGV01000459
175831
Bacillota
ACG
Arg
>WENV183504076
OMGV01000191
291634
Bacillota
GAA
Phe
>WENV183503969
OMGV01000017
183957
Bacillota
CCT
Arg
>WENV183504118
OMGV01000296
346451
Bacillota
TTT
Lys
>WENV183504262
OMGV01001037
346451
Bacillota
TTT
Lys
>WENV183504483
OMGV01014349
295350
Bacillota
TGC
Ala
>WENV183504309
OMGV01001476
480322
Bacillota
CTG
Gln
>WENV183504361
OMGV01002492
480322
Bacillota
CTG
Gln
>WENV183504405
OMGV01004558
175868
Bacillota
GTT
Asn
>WENV183504347
OMGV01002117
284744
Bacillota
TTT
Lys
>WENV183504420
OMGV01005400
322848
Bacillota
CTT
Lys
>WENV183504419
OMGV01005400
398854
Bacillota
CTC
Glu
>WENV183504366
OMGV01002620
291576
Bacillota
CCC
Gly
>WENV183504468
OMGV01010594
480324
Bacillota
TTG
Gln
>WENV183504266
OMGV01001070
497729
Bacillota
CCA
Trp
>WENV183504300
OMGV01001357
175899
Bacillota
GTC
Asp
>WENV183504190
OMGV01000596
56079
Bacillota
AAG
Leu
>WENV183504334
OMGV01001897
179935
Bacillota
GTC
Asp
>WENV183504078
OMGV01000200
117745
Bacillota
GTA
Tyr
>WENV183504236
OMGV01000795
280444
Bacillota
GGT
Thr
>WENV183504063
OMGV01000170
46643
Bacillota
TGA
Ser
>WENV183504084
OMGV01000227
179755
Bacillota
CCG
Arg
>WENV183504348
OMGV01002117
401111
Bacillota
TTC
Glu
>WENV183504501
OMGV01017779
58120
Bacillota
AAG
Leu
>WENV183504394
OMGV01003721
46835
Bacillota
TAA
Leu
>WENV183504335
OMGV01001897
284742
Bacillota
GAA
Phe
>WENV183504179
OMGV01000535
398832
Bacillota
TTC
Glu
>WENV183503975
OMGV01000018
118669
Bacillota
GTA
Tyr
>WENV183504052
OMGV01000135
280462
Bacillota
GAA
Phe
>WENV183504085
OMGV01000232
398852
Bacillota
CTC
Glu
>WENV183504086
OMGV01000232
398852
Bacillota
CTC
Glu
>WENV183504252
OMGV01000905
398852
Bacillota
CTC
Glu
>WENV183504112
OMGV01000291
289123
Bacillota
GGT
Thr
>WENV183504217
OMGV01000704
184539
Bacillota
TCT
Arg
>WENV183504185
OMGV01000582
175857
Bacillota
GTG
His
>WENV183504317
OMGV01001630
398833
Bacillota
TGT
Thr
>WENV183504235
OMGV01000795
175849
Bacillota
GTC
Asp
>WENV183504187
OMGV01000582
280463
Bacillota
TTT
Lys
>WENV183504121
OMGV01000312
405393
Bacillota
GCC
Gly
>WENV183504320
OMGV01001664
56074
Bacillota
TGA
Ser
>WENV183504228
OMGV01000760
482078
Bacillota
CCC
Gly
>WENV183504269
OMGV01001090
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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