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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
40 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183504909
OMGW01022021
343590
Bacillota
GCC
Gly
>WENV183504576
OMGW01000075
280428
Bacillota
GAA
Phe
>WENV183504947
OMGW01030649
291579
Bacillota
GAA
Phe
>WENV183504615
OMGW01000203
229015
Bacillota
GTG
His
>WENV183504643
OMGW01000417
175842
Bacillota
CAC
Val
>WENV183504580
OMGW01000088
190476
Bacillota
CAT
Met
>WENV183504699
OMGW01001107
73664
Bacillota
CAG
Leu
>WENV183504579
OMGW01000077
280447
Bacillota
GAC
Val
>WENV183504734
OMGW01001941
280447
Bacillota
GAC
Val
>WENV183504569
OMGW01000059
5692
Bacillota
GCT
Ser
>WENV183504556
OMGW01000029
481217
Bacillota
GCA
Cys
>WENV183504776
OMGW01003814
481217
Bacillota
GCA
Cys
>WENV183504564
OMGW01000051
291581
Bacillota
CGG
Pro
>WENV183504574
OMGW01000071
175859
Bacillota
TCT
Arg
>WENV183504609
OMGW01000189
175831
Bacillota
ACG
Arg
>WENV183504629
OMGW01000279
284627
Bacillota
GAA
Phe
>WENV183504694
OMGW01000996
284627
Bacillota
GAA
Phe
>WENV183504563
OMGW01000051
480322
Bacillota
CTG
Gln
>WENV183504562
OMGW01000048
175868
Bacillota
GTT
Asn
>WENV183504561
OMGW01000048
398854
Bacillota
CTC
Glu
>WENV183504570
OMGW01000065
291576
Bacillota
CCC
Gly
>WENV183504565
OMGW01000052
480324
Bacillota
TTG
Gln
>WENV183504904
OMGW01019699
497729
Bacillota
CCA
Trp
>WENV183504604
OMGW01000140
303718
Bacillota
TGT
Thr
>WENV183504897
OMGW01018014
186051
Bacillota
GAT
Ile
>WENV183504560
OMGW01000045
280444
Bacillota
GGT
Thr
>WENV183504732
OMGW01001894
179755
Bacillota
CCG
Arg
>WENV183504992
OMGW01043254
289761
Bacillota
TTT
Lys
>WENV183504953
OMGW01030847
46835
Bacillota
TAA
Leu
>WENV183504581
OMGW01000088
398832
Bacillota
TTC
Glu
>WENV183504705
OMGW01001177
118669
Bacillota
GTA
Tyr
>WENV183504719
OMGW01001517
280476
Bacillota
TTT
Lys
>WENV183504916
OMGW01023410
280476
Bacillota
TTT
Lys
>WENV183504899
OMGW01018449
201856
Bacillota
GAT
Ile
>WENV183504559
OMGW01000044
398833
Bacillota
TGT
Thr
>WENV183504936
OMGW01028424
175849
Bacillota
GTC
Asp
>WENV183504716
OMGW01001517
179166
Bacillota
TCT
Arg
>WENV183504850
OMGW01009602
280486
Bacillota
TGC
Ala
>WENV183504568
OMGW01000059
56074
Bacillota
TGA
Ser
>WENV183504545
OMGW01000004
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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