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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
24 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183510111
OMHM01000053
243647
Bacillota
TTT
Lys
>WENV183510105
OMHM01000025
16842
Bacillota
CGA
Ser
>WENV183510151
OMHM01000363
147639
Bacillota
ACG
Arg
>WENV183510104
OMHM01000003
16834
Bacillota
GCT
Ser
>WENV183510209
OMHM01001833
114002
Bacillota
CAA
Leu
>WENV183510108
OMHM01000036
37437
Bacillota
TAA
Leu
>WENV183510197
OMHM01001331
173314
Bacillota
GAT
Ile
>WENV183510116
OMHM01000067
147135
Bacillota
ACG
Arg
>WENV183510163
OMHM01000393
342895
Bacillota
CAT
Met
>WENV183510226
OMHM01005385
238745
Bacillota
CTT
Lys
>WENV183510112
OMHM01000060
194150
Bacillota
TGG
Pro
>WENV183510138
OMHM01000306
250349
Bacillota
GAA
Phe
>WENV183510217
OMHM01003751
10779
Bacillota
CGA
Ser
>WENV183510224
OMHM01005184
340986
Bacillota
CCT
Arg
>WENV183510137
OMHM01000306
235197
Bacillota
GTC
Asp
>WENV183510106
OMHM01000036
368876
Bacillota
GCC
Gly
>WENV183510109
OMHM01000053
243613
Bacillota
GTG
His
>WENV183510121
OMHM01000111
152491
Bacillota
CAT
Met
>WENV183510117
OMHM01000111
273029
Bacillota
TGT
Thr
>WENV183510120
OMHM01000111
281472
Bacillota
GGT
Thr
>WENV183510114
OMHM01000060
178024
Bacillota
TCT
Arg
>WENV183510189
OMHM01001074
413657
Bacillota
CCC
Gly
>WENV183510130
OMHM01000195
287034
Bacillota
GTT
Asn
>WENV183510110
OMHM01000053
343027
Bacillota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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