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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
31 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183510116
OMHM01000067
184537
Bacillota
ACG
Arg
>WENV183510107
OMHM01000036
408526
Bacillota
GCA
Cys
>WENV183510224
OMHM01005184
401881
Bacillota
CCT
Arg
>WENV183510120
OMHM01000111
296855
Bacillota
GGT
Thr
>WENV183510173
OMHM01000584
48505
Bacillota
TGA
Ser
>WENV183510184
OMHM01000915
289717
Bacillota
CTT
Lys
>WENV183510197
OMHM01001331
179563
Bacillota
GAT
Ile
>WENV183510104
OMHM01000003
20932
Bacillota
GCT
Ser
>WENV183510138
OMHM01000306
291553
Bacillota
GAA
Phe
>WENV183510150
OMHM01000363
47119
Bacillota
TAA
Leu
>WENV183510189
OMHM01001074
482593
Bacillota
CCC
Gly
>WENV183510171
OMHM01000554
339995
Bacillota
TGC
Ala
>WENV183510168
OMHM01000506
20942
Bacillota
GGA
Ser
>WENV183510121
OMHM01000111
184495
Bacillota
CAT
Met
>WENV183510209
OMHM01001833
141202
Bacillota
CAA
Leu
>WENV183510151
OMHM01000363
179130
Bacillota
ACG
Arg
>WENV183510117
OMHM01000111
289713
Bacillota
TGT
Thr
>WENV183510110
OMHM01000053
404091
Bacillota
TTG
Gln
>WENV183510109
OMHM01000053
289716
Bacillota
GTG
His
>WENV183510147
OMHM01000363
119278
Bacillota
TAG
Leu
>WENV183510217
OMHM01003751
13468
Bacillota
CGA
Ser
>WENV183510226
OMHM01005385
288974
Bacillota
CTT
Lys
>WENV183510113
OMHM01000060
480337
Bacillota
TCC
Gly
>WENV183510183
OMHM01000913
119459
Bacillota
TAG
Leu
>WENV183510130
OMHM01000195
333281
Bacillota
GTT
Asn
>WENV183510137
OMHM01000306
280547
Bacillota
GTC
Asp
>WENV183510111
OMHM01000053
289761
Bacillota
TTT
Lys
>WENV183510154
OMHM01000363
228403
Bacillota
CAT
Met
>WENV183510105
OMHM01000025
20943
Bacillota
CGA
Ser
>WENV183510112
OMHM01000060
208539
Bacillota
TGG
Pro
>WENV183510114
OMHM01000060
184539
Bacillota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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