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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
61 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183521308
OMNU01003191
99852
Bacillota
GTA
Tyr
>WENV183521354
OMNU01004040
99852
Bacillota
GTA
Tyr
>WENV183521833
OMNU01037964
280500
Bacillota
TGC
Ala
>WENV183521010
OMNU01000282
405363
Bacillota
GCA
Cys
>WENV183521302
OMNU01003116
175842
Bacillota
CAC
Val
>WENV183521414
OMNU01005754
175842
Bacillota
CAC
Val
>WENV183520928
OMNU01000069
407852
Bacillota
TTC
Glu
>WENV183521817
OMNU01033740
179563
Bacillota
GAT
Ile
>WENV183521321
OMNU01003485
179176
Bacillota
ACG
Arg
>WENV183521153
OMNU01000938
406553
Bacillota
TTG
Gln
>WENV183521816
OMNU01033740
295166
Bacillota
TGC
Ala
>WENV183521096
OMNU01000607
190476
Bacillota
CAT
Met
>WENV183521222
OMNU01001794
73664
Bacillota
CAG
Leu
>WENV183520974
OMNU01000146
280447
Bacillota
GAC
Val
>WENV183521088
OMNU01000560
280447
Bacillota
GAC
Val
>WENV183521098
OMNU01000608
280447
Bacillota
GAC
Val
>WENV183521791
OMNU01030114
175825
Bacillota
GAT
Ile
>WENV183521805
OMNU01031408
175825
Bacillota
GAT
Ile
>WENV183521105
OMNU01000632
284723
Bacillota
TAC
Val
>WENV183521353
OMNU01004040
73009
Bacillota
CAG
Leu
>WENV183521078
OMNU01000542
291581
Bacillota
CGG
Pro
>WENV183521362
OMNU01004210
291581
Bacillota
CGG
Pro
>WENV183521176
OMNU01001152
175859
Bacillota
TCT
Arg
>WENV183521804
OMNU01031408
280436
Bacillota
TGC
Ala
>WENV183521099
OMNU01000621
175831
Bacillota
ACG
Arg
>WENV183521666
OMNU01016862
484885
Bacillota
TCC
Gly
>WENV183521048
OMNU01000461
480322
Bacillota
CTG
Gln
>WENV183521056
OMNU01000481
480322
Bacillota
CTG
Gln
>WENV183521077
OMNU01000542
480322
Bacillota
CTG
Gln
>WENV183521361
OMNU01004210
480322
Bacillota
CTG
Gln
>WENV183521021
OMNU01000326
175868
Bacillota
GTT
Asn
>WENV183521724
OMNU01021796
175868
Bacillota
GTT
Asn
>WENV183521935
OMNU01061578
119278
Bacillota
TAG
Leu
>WENV183521723
OMNU01021796
398854
Bacillota
CTC
Glu
>WENV183521006
OMNU01000262
291576
Bacillota
CCC
Gly
>WENV183521025
OMNU01000333
291576
Bacillota
CCC
Gly
>WENV183520926
OMNU01000059
480324
Bacillota
TTG
Gln
>WENV183521221
OMNU01001794
56079
Bacillota
AAG
Leu
>WENV183522016
OMNU01094116
186051
Bacillota
GAT
Ile
>WENV183521390
OMNU01004958
117745
Bacillota
GTA
Tyr
>WENV183521162
OMNU01001050
280444
Bacillota
GGT
Thr
>WENV183521165
OMNU01001050
280444
Bacillota
GGT
Thr
>WENV183521569
OMNU01012060
46643
Bacillota
TGA
Ser
>WENV183521220
OMNU01001789
404105
Bacillota
TTG
Gln
>WENV183521281
OMNU01002698
179755
Bacillota
CCG
Arg
>WENV183521496
OMNU01008537
179755
Bacillota
CCG
Arg
>WENV183521567
OMNU01011997
179755
Bacillota
CCG
Arg
>WENV183521319
OMNU01003355
291650
Bacillota
TGC
Ala
>WENV183521097
OMNU01000607
398832
Bacillota
TTC
Glu
>WENV183521326
OMNU01003578
398832
Bacillota
TTC
Glu
>WENV183521234
OMNU01002008
398852
Bacillota
CTC
Glu
>WENV183521490
OMNU01008296
289123
Bacillota
GGT
Thr
>WENV183521752
OMNU01025358
280483
Bacillota
GAA
Phe
>WENV183521432
OMNU01006282
175857
Bacillota
GTG
His
>WENV183521753
OMNU01025358
285756
Bacillota
GCC
Gly
>WENV183521039
OMNU01000419
398833
Bacillota
TGT
Thr
>WENV183521164
OMNU01001050
175849
Bacillota
GTC
Asp
>WENV183521434
OMNU01006282
280463
Bacillota
TTT
Lys
>WENV183521746
OMNU01024834
280486
Bacillota
TGC
Ala
>WENV183521178
OMNU01001161
280473
Bacillota
TGG
Pro
>WENV183521224
OMNU01001854
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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