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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
126 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183523913
ONZS01016938
176033
Bacillota
CAT
Met
>WENV183523862
ONZS01010567
280500
Bacillota
TGC
Ala
>WENV183523963
ONZS01023460
280500
Bacillota
TGC
Ala
>WENV183523064
ONZS01000022
405363
Bacillota
GCA
Cys
>WENV183523723
ONZS01002845
405363
Bacillota
GCA
Cys
>WENV183523023
ONZS01000006
290391
Bacillota
TAC
Val
>WENV183523060
ONZS01000022
280428
Bacillota
GAA
Phe
>WENV183523146
ONZS01000056
280428
Bacillota
GAA
Phe
>WENV183523271
ONZS01000187
291579
Bacillota
GAA
Phe
>WENV183523287
ONZS01000210
291579
Bacillota
GAA
Phe
>WENV183523334
ONZS01000271
291579
Bacillota
GAA
Phe
>WENV183523144
ONZS01000056
280466
Bacillota
TAC
Val
>WENV183523618
ONZS01001770
280466
Bacillota
TAC
Val
>WENV183523553
ONZS01001182
284746
Bacillota
CTG
Gln
>WENV183523056
ONZS01000020
175842
Bacillota
CAC
Val
>WENV183523598
ONZS01001533
175842
Bacillota
CAC
Val
>WENV183523938
ONZS01018398
280639
Bacillota
TTT
Lys
>WENV183523869
ONZS01011281
291629
Bacillota
CCA
Trp
>WENV183523873
ONZS01011742
184497
Bacillota
GGG
Pro
>WENV183523922
ONZS01016985
176018
Bacillota
CAT
Met
>WENV183523990
ONZS01028854
141334
Bacillota
TAG
Leu
>WENV183523175
ONZS01000085
190476
Bacillota
CAT
Met
>WENV183523150
ONZS01000058
73664
Bacillota
CAG
Leu
>WENV183523243
ONZS01000150
73664
Bacillota
CAG
Leu
>WENV183523050
ONZS01000020
280447
Bacillota
GAC
Val
>WENV183523158
ONZS01000069
280447
Bacillota
GAC
Val
>WENV183523418
ONZS01000493
280447
Bacillota
GAC
Val
>WENV183523481
ONZS01000756
280447
Bacillota
GAC
Val
>WENV183523160
ONZS01000069
5692
Bacillota
GCT
Ser
>WENV183523346
ONZS01000288
5692
Bacillota
GCT
Ser
>WENV183523915
ONZS01016938
184171
Bacillota
CAT
Met
>WENV183523620
ONZS01001814
186123
Bacillota
GTC
Asp
>WENV183523866
ONZS01011281
186123
Bacillota
GTC
Asp
>WENV183523387
ONZS01000373
284723
Bacillota
TAC
Val
>WENV183523066
ONZS01000022
73009
Bacillota
CAG
Leu
>WENV183523264
ONZS01000184
73009
Bacillota
CAG
Leu
>WENV183523294
ONZS01000218
73009
Bacillota
CAG
Leu
>WENV183523532
ONZS01001037
73009
Bacillota
CAG
Leu
>WENV183523989
ONZS01028854
283502
Bacillota
TTT
Lys
>WENV183523933
ONZS01018398
402717
Bacillota
TTC
Glu
>WENV183523790
ONZS01004969
280646
Bacillota
TGC
Ala
>WENV183523068
ONZS01000022
291581
Bacillota
CGG
Pro
>WENV183523097
ONZS01000032
175859
Bacillota
TCT
Arg
>WENV183523282
ONZS01000204
175859
Bacillota
TCT
Arg
>WENV183523936
ONZS01018398
280641
Bacillota
GTT
Asn
>WENV183523320
ONZS01000254
179810
Bacillota
TCT
Arg
>WENV183523290
ONZS01000211
284627
Bacillota
GAA
Phe
>WENV183523380
ONZS01000356
284627
Bacillota
GAA
Phe
>WENV183523436
ONZS01000574
284627
Bacillota
GAA
Phe
>WENV183523919
ONZS01016985
176015
Bacillota
TGG
Pro
>WENV183523621
ONZS01001814
291634
Bacillota
GAA
Phe
>WENV183523867
ONZS01011281
291634
Bacillota
GAA
Phe
>WENV183523044
ONZS01000016
294020
Bacillota
TAC
Val
>WENV183523206
ONZS01000118
294020
Bacillota
TAC
Val
>WENV183523529
ONZS01000976
294020
Bacillota
TAC
Val
>WENV183523981
ONZS01028038
295350
Bacillota
TGC
Ala
>WENV183523987
ONZS01028854
281302
Bacillota
GTG
His
>WENV183523563
ONZS01001247
482449
Bacillota
TCC
Gly
>WENV183523861
ONZS01010567
175916
Bacillota
GAT
Ile
>WENV183523015
ONZS01000004
480322
Bacillota
CTG
Gln
>WENV183523067
ONZS01000022
480322
Bacillota
CTG
Gln
>WENV183523385
ONZS01000370
480322
Bacillota
CTG
Gln
>WENV183523749
ONZS01003859
480322
Bacillota
CTG
Gln
>WENV183523045
ONZS01000016
187364
Bacillota
CAT
Met
>WENV183523139
ONZS01000056
175868
Bacillota
GTT
Asn
>WENV183523401
ONZS01000430
175868
Bacillota
GTT
Asn
>WENV183523496
ONZS01000811
284744
Bacillota
TTT
Lys
>WENV183523843
ONZS01008830
119278
Bacillota
TAG
Leu
>WENV183523400
ONZS01000430
398854
Bacillota
CTC
Glu
>WENV183523592
ONZS01001494
398854
Bacillota
CTC
Glu
>WENV183523616
ONZS01001768
291576
Bacillota
CCC
Gly
>WENV183523069
ONZS01000022
480324
Bacillota
TTG
Gln
>WENV183523473
ONZS01000687
480324
Bacillota
TTG
Gln
>WENV183523627
ONZS01001848
175899
Bacillota
GTC
Asp
>WENV183523810
ONZS01006151
175911
Bacillota
GTC
Asp
>WENV183523888
ONZS01012979
292374
Bacillota
TGC
Ala
>WENV183523499
ONZS01000811
179935
Bacillota
GTC
Asp
>WENV183523982
ONZS01028038
186051
Bacillota
GAT
Ile
>WENV183523201
ONZS01000114
398857
Bacillota
TTC
Glu
>WENV183523633
ONZS01001850
398857
Bacillota
TTC
Glu
>WENV183523053
ONZS01000020
280444
Bacillota
GGT
Thr
>WENV183523055
ONZS01000020
280444
Bacillota
GGT
Thr
>WENV183523645
ONZS01001970
280444
Bacillota
GGT
Thr
>WENV183523647
ONZS01001970
280444
Bacillota
GGT
Thr
>WENV183523205
ONZS01000117
483485
Bacillota
CCC
Gly
>WENV183523177
ONZS01000085
179755
Bacillota
CCG
Arg
>WENV183523430
ONZS01000549
179755
Bacillota
CCG
Arg
>WENV183523497
ONZS01000811
401111
Bacillota
TTC
Glu
>WENV183523567
ONZS01001247
401111
Bacillota
TTC
Glu
>WENV183523743
ONZS01003638
58120
Bacillota
AAG
Leu
>WENV183523801
ONZS01005747
58120
Bacillota
AAG
Leu
>WENV183523891
ONZS01013519
58120
Bacillota
AAG
Leu
>WENV183523391
ONZS01000375
46835
Bacillota
TAA
Leu
>WENV183523500
ONZS01000811
284742
Bacillota
GAA
Phe
>WENV183523176
ONZS01000085
398832
Bacillota
TTC
Glu
>WENV183523100
ONZS01000034
118669
Bacillota
GTA
Tyr
>WENV183523153
ONZS01000061
118669
Bacillota
GTA
Tyr
>WENV183523253
ONZS01000168
118669
Bacillota
GTA
Tyr
>WENV183523378
ONZS01000356
118669
Bacillota
GTA
Tyr
>WENV183523434
ONZS01000574
118669
Bacillota
GTA
Tyr
>WENV183524001
ONZS01032473
175915
Bacillota
GTC
Asp
>WENV183523859
ONZS01010421
282758
Bacillota
CCA
Trp
>WENV183523007
ONZS01000003
398852
Bacillota
CTC
Glu
>WENV183523008
ONZS01000003
398852
Bacillota
CTC
Glu
>WENV183523009
ONZS01000003
398852
Bacillota
CTC
Glu
>WENV183523985
ONZS01028402
289123
Bacillota
GGT
Thr
>WENV183522994
ONZS01000001
406186
Bacillota
CTC
Glu
>WENV183522995
ONZS01000001
406186
Bacillota
CTC
Glu
>WENV183523974
ONZS01027107
285601
Bacillota
TTC
Glu
>WENV183523321
ONZS01000254
175857
Bacillota
GTG
His
>WENV183523512
ONZS01000886
175857
Bacillota
GTG
His
>WENV183523089
ONZS01000029
398833
Bacillota
TGT
Thr
>WENV183523225
ONZS01000135
398833
Bacillota
TGT
Thr
>WENV183523054
ONZS01000020
175849
Bacillota
GTC
Asp
>WENV183523062
ONZS01000022
175849
Bacillota
GTC
Asp
>WENV183523145
ONZS01000056
175849
Bacillota
GTC
Asp
>WENV183523646
ONZS01001970
175849
Bacillota
GTC
Asp
>WENV183523920
ONZS01016985
176017
Bacillota
GAT
Ile
>WENV183523288
ONZS01000210
280463
Bacillota
TTT
Lys
>WENV183523437
ONZS01000574
280463
Bacillota
TTT
Lys
>WENV183523622
ONZS01001814
405393
Bacillota
GCC
Gly
>WENV183523868
ONZS01011281
405393
Bacillota
GCC
Gly
>WENV183523159
ONZS01000069
56074
Bacillota
TGA
Ser
>WENV183523345
ONZS01000288
56074
Bacillota
TGA
Ser
>WENV183523051
ONZS01000020
280473
Bacillota
TGG
Pro
>WENV183523833
ONZS01007482
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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