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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
82 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183529714
ONZZ01004092
99852
Bacillota
GTA
Tyr
>WENV183529430
ONZZ01000657
404076
Bacillota
GCC
Gly
>WENV183529434
ONZZ01000657
404076
Bacillota
GCC
Gly
>WENV183530005
ONZZ01034393
280500
Bacillota
TGC
Ala
>WENV183529428
ONZZ01000657
184504
Bacillota
GTC
Asp
>WENV183529432
ONZZ01000657
184504
Bacillota
GTC
Asp
>WENV183529562
ONZZ01001428
405363
Bacillota
GCA
Cys
>WENV183529256
ONZZ01000253
290391
Bacillota
TAC
Val
>WENV183529524
ONZZ01001152
290391
Bacillota
TAC
Val
>WENV183529496
ONZZ01001013
280428
Bacillota
GAA
Phe
>WENV183529775
ONZZ01005970
291579
Bacillota
GAA
Phe
>WENV183529591
ONZZ01001676
175842
Bacillota
CAC
Val
>WENV183529688
ONZZ01003393
175842
Bacillota
CAC
Val
>WENV183529391
ONZZ01000541
291629
Bacillota
CCA
Trp
>WENV183529951
ONZZ01022898
184497
Bacillota
GGG
Pro
>WENV183529702
ONZZ01003695
179176
Bacillota
ACG
Arg
>WENV183529353
ONZZ01000433
295166
Bacillota
TGC
Ala
>WENV183529140
ONZZ01000065
404079
Bacillota
CAT
Met
>WENV183529500
ONZZ01001047
190476
Bacillota
CAT
Met
>WENV183529512
ONZZ01001125
280447
Bacillota
GAC
Val
>WENV183529800
ONZZ01006959
280447
Bacillota
GAC
Val
>WENV183529175
ONZZ01000115
312274
Bacillota
GGC
Ala
>WENV183529218
ONZZ01000181
186123
Bacillota
GTC
Asp
>WENV183529821
ONZZ01008181
291581
Bacillota
CGG
Pro
>WENV183529527
ONZZ01001161
175859
Bacillota
TCT
Arg
>WENV183529610
ONZZ01001859
175831
Bacillota
ACG
Arg
>WENV183529651
ONZZ01002474
175831
Bacillota
ACG
Arg
>WENV183529785
ONZZ01006499
179810
Bacillota
TCT
Arg
>WENV183529717
ONZZ01004121
284627
Bacillota
GAA
Phe
>WENV183529219
ONZZ01000181
291634
Bacillota
GAA
Phe
>WENV183529462
ONZZ01000804
183957
Bacillota
CCT
Arg
>WENV183529740
ONZZ01004667
482449
Bacillota
TCC
Gly
>WENV183529217
ONZZ01000180
480322
Bacillota
CTG
Gln
>WENV183529649
ONZZ01002457
480322
Bacillota
CTG
Gln
>WENV183529787
ONZZ01006499
401685
Bacillota
TTG
Gln
>WENV183529631
ONZZ01002163
175868
Bacillota
GTT
Asn
>WENV183529802
ONZZ01006995
175868
Bacillota
GTT
Asn
>WENV183529815
ONZZ01007799
175868
Bacillota
GTT
Asn
>WENV183529825
ONZZ01008229
175868
Bacillota
GTT
Asn
>WENV183529836
ONZZ01009667
175868
Bacillota
GTT
Asn
>WENV183529507
ONZZ01001104
322848
Bacillota
CTT
Lys
>WENV183529801
ONZZ01006995
398854
Bacillota
CTC
Glu
>WENV183529814
ONZZ01007799
398854
Bacillota
CTC
Glu
>WENV183529824
ONZZ01008229
398854
Bacillota
CTC
Glu
>WENV183529502
ONZZ01001053
291576
Bacillota
CCC
Gly
>WENV183529563
ONZZ01001429
291576
Bacillota
CCC
Gly
>WENV183529833
ONZZ01009336
291576
Bacillota
CCC
Gly
>WENV183529533
ONZZ01001181
480324
Bacillota
TTG
Gln
>WENV183529593
ONZZ01001714
480324
Bacillota
TTG
Gln
>WENV183529627
ONZZ01002073
480324
Bacillota
TTG
Gln
>WENV183529654
ONZZ01002540
480324
Bacillota
TTG
Gln
>WENV183529795
ONZZ01006644
497729
Bacillota
CCA
Trp
>WENV183529523
ONZZ01001152
180688
Bacillota
GTC
Asp
>WENV183529971
ONZZ01025940
186051
Bacillota
GAT
Ile
>WENV183529976
ONZZ01026947
398857
Bacillota
TTC
Glu
>WENV183529531
ONZZ01001177
280444
Bacillota
GGT
Thr
>WENV183529532
ONZZ01001177
280444
Bacillota
GGT
Thr
>WENV183529746
ONZZ01004782
280444
Bacillota
GGT
Thr
>WENV183529849
ONZZ01010748
291597
Bacillota
TGC
Ala
>WENV183529755
ONZZ01005211
321753
Bacillota
GCC
Gly
>WENV183529596
ONZZ01001758
179755
Bacillota
CCG
Arg
>WENV183529748
ONZZ01004979
179755
Bacillota
CCG
Arg
>WENV183529826
ONZZ01008368
179755
Bacillota
CCG
Arg
>WENV183529696
ONZZ01003511
58120
Bacillota
AAG
Leu
>WENV183529763
ONZZ01005307
46835
Bacillota
TAA
Leu
>WENV183529501
ONZZ01001047
398832
Bacillota
TTC
Glu
>WENV183529646
ONZZ01002440
118669
Bacillota
GTA
Tyr
>WENV183529839
ONZZ01009813
118669
Bacillota
GTA
Tyr
>WENV183529629
ONZZ01002159
280476
Bacillota
TTT
Lys
>WENV183529828
ONZZ01008787
398852
Bacillota
CTC
Glu
>WENV183529246
ONZZ01000224
289123
Bacillota
GGT
Thr
>WENV183529365
ONZZ01000449
321248
Bacillota
TAC
Val
>WENV183529786
ONZZ01006499
175857
Bacillota
GTG
His
>WENV183529399
ONZZ01000581
398833
Bacillota
TGT
Thr
>WENV183529521
ONZZ01001152
285556
Bacillota
TGT
Thr
>WENV183529530
ONZZ01001177
175849
Bacillota
GTC
Asp
>WENV183529047
ONZZ01000003
405393
Bacillota
GCC
Gly
>WENV183529633
ONZZ01002236
56074
Bacillota
TGA
Ser
>WENV183529606
ONZZ01001812
280473
Bacillota
TGG
Pro
>WENV183529607
ONZZ01001836
280473
Bacillota
TGG
Pro
>WENV183529731
ONZZ01004509
280473
Bacillota
TGG
Pro
>WENV183529834
ONZZ01009351
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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