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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
92 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183534329
OOAE01059322
280500
Bacillota
TGC
Ala
>WENV183533478
OOAE01000650
405363
Bacillota
GCA
Cys
>WENV183533933
OOAE01004350
290391
Bacillota
TAC
Val
>WENV183533257
OOAE01000177
280428
Bacillota
GAA
Phe
>WENV183533127
OOAE01000012
291579
Bacillota
GAA
Phe
>WENV183534010
OOAE01006198
280492
Bacillota
CTT
Lys
>WENV183533764
OOAE01002145
175842
Bacillota
CAC
Val
>WENV183533770
OOAE01002166
175842
Bacillota
CAC
Val
>WENV183533121
OOAE01000010
184497
Bacillota
GGG
Pro
>WENV183533741
OOAE01001861
184497
Bacillota
GGG
Pro
>WENV183534061
OOAE01009084
398915
Bacillota
TTC
Glu
>WENV183533125
OOAE01000012
179176
Bacillota
ACG
Arg
>WENV183533487
OOAE01000683
179176
Bacillota
ACG
Arg
>WENV183533672
OOAE01001334
179176
Bacillota
ACG
Arg
>WENV183533607
OOAE01001063
295166
Bacillota
TGC
Ala
>WENV183533674
OOAE01001350
190476
Bacillota
CAT
Met
>WENV183533913
OOAE01004032
190476
Bacillota
CAT
Met
>WENV183533379
OOAE01000383
73664
Bacillota
CAG
Leu
>WENV183533484
OOAE01000675
280447
Bacillota
GAC
Val
>WENV183533518
OOAE01000756
280447
Bacillota
GAC
Val
>WENV183533661
OOAE01001332
280447
Bacillota
GAC
Val
>WENV183534031
OOAE01007564
280447
Bacillota
GAC
Val
>WENV183533391
OOAE01000415
5692
Bacillota
GCT
Ser
>WENV183533550
OOAE01000841
5692
Bacillota
GCT
Ser
>WENV183534020
OOAE01006751
5692
Bacillota
GCT
Ser
>WENV183533756
OOAE01002084
186123
Bacillota
GTC
Asp
>WENV183534294
OOAE01048510
175825
Bacillota
GAT
Ile
>WENV183533255
OOAE01000177
280427
Bacillota
TAC
Val
>WENV183533626
OOAE01001141
284723
Bacillota
TAC
Val
>WENV183533766
OOAE01002151
73009
Bacillota
CAG
Leu
>WENV183533785
OOAE01002236
73009
Bacillota
CAG
Leu
>WENV183534255
OOAE01038188
481217
Bacillota
GCA
Cys
>WENV183533596
OOAE01001019
175859
Bacillota
TCT
Arg
>WENV183533783
OOAE01002236
175859
Bacillota
TCT
Arg
>WENV183534265
OOAE01041142
175859
Bacillota
TCT
Arg
>WENV183534293
OOAE01048510
280436
Bacillota
TGC
Ala
>WENV183533455
OOAE01000569
175831
Bacillota
ACG
Arg
>WENV183533410
OOAE01000455
284627
Bacillota
GAA
Phe
>WENV183533757
OOAE01002084
291634
Bacillota
GAA
Phe
>WENV183533360
OOAE01000324
294020
Bacillota
TAC
Val
>WENV183533869
OOAE01003392
484885
Bacillota
TCC
Gly
>WENV183533603
OOAE01001039
480322
Bacillota
CTG
Gln
>WENV183533636
OOAE01001198
480322
Bacillota
CTG
Gln
>WENV183533737
OOAE01001820
480322
Bacillota
CTG
Gln
>WENV183534088
OOAE01011329
187364
Bacillota
CAT
Met
>WENV183533546
OOAE01000831
175868
Bacillota
GTT
Asn
>WENV183533799
OOAE01002456
175868
Bacillota
GTT
Asn
>WENV183534015
OOAE01006636
175868
Bacillota
GTT
Asn
>WENV183534022
OOAE01006968
175868
Bacillota
GTT
Asn
>WENV183533545
OOAE01000831
398854
Bacillota
CTC
Glu
>WENV183534014
OOAE01006636
398854
Bacillota
CTC
Glu
>WENV183534021
OOAE01006968
398854
Bacillota
CTC
Glu
>WENV183533383
OOAE01000398
291576
Bacillota
CCC
Gly
>WENV183533534
OOAE01000794
291576
Bacillota
CCC
Gly
>WENV183533718
OOAE01001568
480324
Bacillota
TTG
Gln
>WENV183533721
OOAE01001578
480324
Bacillota
TTG
Gln
>WENV183533273
OOAE01000198
323864
Bacillota
TGC
Ala
>WENV183534195
OOAE01023832
398857
Bacillota
TTC
Glu
>WENV183534210
OOAE01027861
204381
Bacillota
GAT
Ile
>WENV183533474
OOAE01000640
280444
Bacillota
GGT
Thr
>WENV183533743
OOAE01001895
280444
Bacillota
GGT
Thr
>WENV183533780
OOAE01002211
280444
Bacillota
GGT
Thr
>WENV183533996
OOAE01005797
280444
Bacillota
GGT
Thr
>WENV183533730
OOAE01001708
179755
Bacillota
CCG
Arg
>WENV183533887
OOAE01003608
179755
Bacillota
CCG
Arg
>WENV183533972
OOAE01005062
179755
Bacillota
CCG
Arg
>WENV183534094
OOAE01011683
58120
Bacillota
AAG
Leu
>WENV183533232
OOAE01000138
330413
Bacillota
CTT
Lys
>WENV183533675
OOAE01001350
398832
Bacillota
TTC
Glu
>WENV183533859
OOAE01003257
398832
Bacillota
TTC
Glu
>WENV183533914
OOAE01004032
398832
Bacillota
TTC
Glu
>WENV183533767
OOAE01002153
118669
Bacillota
GTA
Tyr
>WENV183533414
OOAE01000466
398852
Bacillota
CTC
Glu
>WENV183533415
OOAE01000466
398852
Bacillota
CTC
Glu
>WENV183533416
OOAE01000466
398852
Bacillota
CTC
Glu
>WENV183533491
OOAE01000693
309916
Bacillota
TTT
Lys
>WENV183534049
OOAE01008935
118359
Bacillota
GTA
Tyr
>WENV183533555
OOAE01000870
289123
Bacillota
GGT
Thr
>WENV183533828
OOAE01002812
184539
Bacillota
TCT
Arg
>WENV183534366
OOAE01074449
285601
Bacillota
TTC
Glu
>WENV183533494
OOAE01000697
285756
Bacillota
GCC
Gly
>WENV183533934
OOAE01004350
285756
Bacillota
GCC
Gly
>WENV183534156
OOAE01017365
398833
Bacillota
TGT
Thr
>WENV183533779
OOAE01002211
175849
Bacillota
GTC
Asp
>WENV183533995
OOAE01005797
175849
Bacillota
GTC
Asp
>WENV183533515
OOAE01000753
405393
Bacillota
GCC
Gly
>WENV183533390
OOAE01000415
56074
Bacillota
TGA
Ser
>WENV183533549
OOAE01000841
56074
Bacillota
TGA
Ser
>WENV183534019
OOAE01006751
56074
Bacillota
TGA
Ser
>WENV183533714
OOAE01001557
280473
Bacillota
TGG
Pro
>WENV183533728
OOAE01001675
280473
Bacillota
TGG
Pro
>WENV183534016
OOAE01006694
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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