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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
89 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183535219
OOAF01004650
99852
Bacillota
GTA
Tyr
>WENV183535345
OOAF01009500
280500
Bacillota
TGC
Ala
>WENV183534768
OOAF01000490
280428
Bacillota
GAA
Phe
>WENV183535300
OOAF01007701
291579
Bacillota
GAA
Phe
>WENV183534440
OOAF01000021
280492
Bacillota
CTT
Lys
>WENV183534710
OOAF01000346
280492
Bacillota
CTT
Lys
>WENV183535183
OOAF01003783
175842
Bacillota
CAC
Val
>WENV183535331
OOAF01009120
291629
Bacillota
CCA
Trp
>WENV183534876
OOAF01000791
184497
Bacillota
GGG
Pro
>WENV183535506
OOAF01036877
179563
Bacillota
GAT
Ile
>WENV183534859
OOAF01000734
184687
Bacillota
CAT
Met
>WENV183535308
OOAF01008093
295166
Bacillota
TGC
Ala
>WENV183534675
OOAF01000297
190476
Bacillota
CAT
Met
>WENV183535066
OOAF01001838
190476
Bacillota
CAT
Met
>WENV183534668
OOAF01000282
73664
Bacillota
CAG
Leu
>WENV183534707
OOAF01000338
73664
Bacillota
CAG
Leu
>WENV183534836
OOAF01000664
280447
Bacillota
GAC
Val
>WENV183535076
OOAF01001922
280447
Bacillota
GAC
Val
>WENV183535111
OOAF01002395
280447
Bacillota
GAC
Val
>WENV183535110
OOAF01002395
5692
Bacillota
GCT
Ser
>WENV183535134
OOAF01002717
5692
Bacillota
GCT
Ser
>WENV183534990
OOAF01001347
186123
Bacillota
GTC
Asp
>WENV183534802
OOAF01000564
73009
Bacillota
CAG
Leu
>WENV183534830
OOAF01000635
73009
Bacillota
CAG
Leu
>WENV183534987
OOAF01001336
73009
Bacillota
CAG
Leu
>WENV183534988
OOAF01001340
73009
Bacillota
CAG
Leu
>WENV183535443
OOAF01023120
481217
Bacillota
GCA
Cys
>WENV183535298
OOAF01007586
280646
Bacillota
TGC
Ala
>WENV183534555
OOAF01000129
291581
Bacillota
CGG
Pro
>WENV183535056
OOAF01001766
291581
Bacillota
CGG
Pro
>WENV183534885
OOAF01000828
175859
Bacillota
TCT
Arg
>WENV183535005
OOAF01001460
175859
Bacillota
TCT
Arg
>WENV183535216
OOAF01004620
175859
Bacillota
TCT
Arg
>WENV183535112
OOAF01002402
175831
Bacillota
ACG
Arg
>WENV183534991
OOAF01001347
291634
Bacillota
GAA
Phe
>WENV183534496
OOAF01000060
294020
Bacillota
TAC
Val
>WENV183535036
OOAF01001601
294020
Bacillota
TAC
Val
>WENV183535435
OOAF01021408
409171
Bacillota
TGT
Thr
>WENV183535003
OOAF01001427
484885
Bacillota
TCC
Gly
>WENV183534664
OOAF01000276
480322
Bacillota
CTG
Gln
>WENV183534890
OOAF01000846
480322
Bacillota
CTG
Gln
>WENV183535055
OOAF01001766
480322
Bacillota
CTG
Gln
>WENV183535115
OOAF01002433
480322
Bacillota
CTG
Gln
>WENV183534554
OOAF01000129
480322
Bacillota
CTG
Gln
>WENV183535285
OOAF01006796
399272
Bacillota
GCA
Cys
>WENV183534771
OOAF01000490
175868
Bacillota
GTT
Asn
>WENV183535130
OOAF01002657
175868
Bacillota
GTT
Asn
>WENV183535092
OOAF01002116
291576
Bacillota
CCC
Gly
>WENV183534941
OOAF01001087
480324
Bacillota
TTG
Gln
>WENV183535172
OOAF01003504
480324
Bacillota
TTG
Gln
>WENV183535512
OOAF01038905
73638
Bacillota
AAG
Leu
>WENV183534705
OOAF01000338
56079
Bacillota
AAG
Leu
>WENV183534706
OOAF01000338
56079
Bacillota
AAG
Leu
>WENV183534954
OOAF01001139
175911
Bacillota
GTC
Asp
>WENV183535466
OOAF01026957
292374
Bacillota
TGC
Ala
>WENV183535319
OOAF01008546
186051
Bacillota
GAT
Ile
>WENV183535463
OOAF01026534
186051
Bacillota
GAT
Ile
>WENV183535113
OOAF01002429
398857
Bacillota
TTC
Glu
>WENV183534774
OOAF01000501
117745
Bacillota
GTA
Tyr
>WENV183535168
OOAF01003367
280444
Bacillota
GGT
Thr
>WENV183534824
OOAF01000622
483485
Bacillota
CCC
Gly
>WENV183535171
OOAF01003483
46643
Bacillota
TGA
Ser
>WENV183535116
OOAF01002467
179755
Bacillota
CCG
Arg
>WENV183535206
OOAF01004355
179755
Bacillota
CCG
Arg
>WENV183534944
OOAF01001108
58120
Bacillota
AAG
Leu
>WENV183535083
OOAF01001962
58120
Bacillota
AAG
Leu
>WENV183535315
OOAF01008379
46835
Bacillota
TAA
Leu
>WENV183534676
OOAF01000297
398832
Bacillota
TTC
Glu
>WENV183535067
OOAF01001838
398832
Bacillota
TTC
Glu
>WENV183534786
OOAF01000518
118669
Bacillota
GTA
Tyr
>WENV183535059
OOAF01001814
118669
Bacillota
GTA
Tyr
>WENV183535314
OOAF01008379
175915
Bacillota
GTC
Asp
>WENV183534681
OOAF01000304
280462
Bacillota
GAA
Phe
>WENV183534493
OOAF01000055
398852
Bacillota
CTC
Glu
>WENV183534494
OOAF01000056
398852
Bacillota
CTC
Glu
>WENV183534578
OOAF01000164
398852
Bacillota
CTC
Glu
>WENV183534579
OOAF01000164
398852
Bacillota
CTC
Glu
>WENV183534568
OOAF01000149
289123
Bacillota
GGT
Thr
>WENV183534384
OOAF01000001
280483
Bacillota
GAA
Phe
>WENV183535336
OOAF01009311
175857
Bacillota
GTG
His
>WENV183534385
OOAF01000001
285756
Bacillota
GCC
Gly
>WENV183535175
OOAF01003552
398833
Bacillota
TGT
Thr
>WENV183534682
OOAF01000304
280463
Bacillota
TTT
Lys
>WENV183535509
OOAF01038297
280486
Bacillota
TGC
Ala
>WENV183534467
OOAF01000033
405393
Bacillota
GCC
Gly
>WENV183535109
OOAF01002395
56074
Bacillota
TGA
Ser
>WENV183535133
OOAF01002717
56074
Bacillota
TGA
Ser
>WENV183534910
OOAF01000951
280473
Bacillota
TGG
Pro
>WENV183534951
OOAF01001128
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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