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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
113 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183538229
OOAH01002125
99852
Bacillota
GTA
Tyr
>WENV183538527
OOAH01007060
99852
Bacillota
GTA
Tyr
>WENV183538240
OOAH01002173
405363
Bacillota
GCA
Cys
>WENV183538736
OOAH01041161
280428
Bacillota
GAA
Phe
>WENV183538196
OOAH01001979
291579
Bacillota
GAA
Phe
>WENV183538317
OOAH01002928
284746
Bacillota
CTG
Gln
>WENV183537623
OOAH01000224
280492
Bacillota
CTT
Lys
>WENV183537633
OOAH01000239
280492
Bacillota
CTT
Lys
>WENV183538430
OOAH01004823
175842
Bacillota
CAC
Val
>WENV183538046
OOAH01001188
291629
Bacillota
CCA
Trp
>WENV183538510
OOAH01006637
29930
Bacillota
GGA
Ser
>WENV183537944
OOAH01000845
184497
Bacillota
GGG
Pro
>WENV183538464
OOAH01005673
176018
Bacillota
CAT
Met
>WENV183538603
OOAH01014262
398915
Bacillota
TTC
Glu
>WENV183537730
OOAH01000353
179176
Bacillota
ACG
Arg
>WENV183538099
OOAH01001446
190476
Bacillota
CAT
Met
>WENV183538287
OOAH01002642
190476
Bacillota
CAT
Met
>WENV183537487
OOAH01000081
73664
Bacillota
CAG
Leu
>WENV183537832
OOAH01000595
280447
Bacillota
GAC
Val
>WENV183537981
OOAH01000998
280447
Bacillota
GAC
Val
>WENV183538305
OOAH01002769
280447
Bacillota
GAC
Val
>WENV183538439
OOAH01005026
280447
Bacillota
GAC
Val
>WENV183538136
OOAH01001543
5692
Bacillota
GCT
Ser
>WENV183538414
OOAH01004640
312274
Bacillota
GGC
Ala
>WENV183538631
OOAH01019008
186123
Bacillota
GTC
Asp
>WENV183538516
OOAH01006797
291558
Bacillota
CTT
Lys
>WENV183538263
OOAH01002390
284723
Bacillota
TAC
Val
>WENV183537774
OOAH01000434
73009
Bacillota
CAG
Leu
>WENV183538509
OOAH01006594
73009
Bacillota
CAG
Leu
>WENV183538530
OOAH01007100
73009
Bacillota
CAG
Leu
>WENV183538410
OOAH01004562
487804
Bacillota
GGT
Thr
>WENV183538466
OOAH01005673
280646
Bacillota
TGC
Ala
>WENV183537849
OOAH01000629
291581
Bacillota
CGG
Pro
>WENV183537853
OOAH01000636
291581
Bacillota
CGG
Pro
>WENV183538075
OOAH01001313
291581
Bacillota
CGG
Pro
>WENV183538082
OOAH01001353
175859
Bacillota
TCT
Arg
>WENV183538272
OOAH01002486
175859
Bacillota
TCT
Arg
>WENV183538590
OOAH01011909
21311
Bacillota
GCT
Ser
>WENV183538242
OOAH01002185
175831
Bacillota
ACG
Arg
>WENV183538571
OOAH01009464
175831
Bacillota
ACG
Arg
>WENV183538281
OOAH01002602
284627
Bacillota
GAA
Phe
>WENV183538632
OOAH01019008
291634
Bacillota
GAA
Phe
>WENV183538009
OOAH01001051
293309
Bacillota
GTT
Asn
>WENV183538230
OOAH01002146
482449
Bacillota
TCC
Gly
>WENV183537848
OOAH01000629
480322
Bacillota
CTG
Gln
>WENV183537852
OOAH01000636
480322
Bacillota
CTG
Gln
>WENV183538074
OOAH01001313
480322
Bacillota
CTG
Gln
>WENV183538176
OOAH01001855
480322
Bacillota
CTG
Gln
>WENV183538226
OOAH01002112
480322
Bacillota
CTG
Gln
>WENV183538503
OOAH01006331
480322
Bacillota
CTG
Gln
>WENV183538024
OOAH01001100
175868
Bacillota
GTT
Asn
>WENV183538172
OOAH01001820
175868
Bacillota
GTT
Asn
>WENV183538426
OOAH01004793
175868
Bacillota
GTT
Asn
>WENV183538450
OOAH01005323
175868
Bacillota
GTT
Asn
>WENV183538502
OOAH01006287
175868
Bacillota
GTT
Asn
>WENV183538544
OOAH01008006
175868
Bacillota
GTT
Asn
>WENV183538570
OOAH01009442
175868
Bacillota
GTT
Asn
>WENV183537986
OOAH01001015
284744
Bacillota
TTT
Lys
>WENV183538487
OOAH01006276
119278
Bacillota
TAG
Leu
>WENV183538425
OOAH01004793
398854
Bacillota
CTC
Glu
>WENV183538449
OOAH01005323
398854
Bacillota
CTC
Glu
>WENV183538501
OOAH01006287
398854
Bacillota
CTC
Glu
>WENV183538543
OOAH01008006
398854
Bacillota
CTC
Glu
>WENV183538569
OOAH01009442
398854
Bacillota
CTC
Glu
>WENV183538253
OOAH01002292
291576
Bacillota
CCC
Gly
>WENV183538348
OOAH01003434
291576
Bacillota
CCC
Gly
>WENV183538073
OOAH01001313
480324
Bacillota
TTG
Gln
>WENV183538239
OOAH01002173
480324
Bacillota
TTG
Gln
>WENV183538309
OOAH01002798
480324
Bacillota
TTG
Gln
>WENV183538384
OOAH01004027
480324
Bacillota
TTG
Gln
>WENV183537610
OOAH01000216
175899
Bacillota
GTC
Asp
>WENV183537485
OOAH01000081
56079
Bacillota
AAG
Leu
>WENV183537486
OOAH01000081
56079
Bacillota
AAG
Leu
>WENV183538189
OOAH01001937
292374
Bacillota
TGC
Ala
>WENV183538473
OOAH01006028
179935
Bacillota
GTC
Asp
>WENV183538742
OOAH01042496
186051
Bacillota
GAT
Ile
>WENV183538004
OOAH01001040
398857
Bacillota
TTC
Glu
>WENV183537567
OOAH01000161
117745
Bacillota
GTA
Tyr
>WENV183537520
OOAH01000107
46643
Bacillota
TGA
Ser
>WENV183538393
OOAH01004157
321753
Bacillota
GCC
Gly
>WENV183538105
OOAH01001469
179755
Bacillota
CCG
Arg
>WENV183538447
OOAH01005287
179755
Bacillota
CCG
Arg
>WENV183538453
OOAH01005373
179755
Bacillota
CCG
Arg
>WENV183538604
OOAH01014262
486506
Bacillota
TCC
Gly
>WENV183537987
OOAH01001015
401111
Bacillota
TTC
Glu
>WENV183538234
OOAH01002146
401111
Bacillota
TTC
Glu
>WENV183538619
OOAH01016473
198522
Bacillota
GAT
Ile
>WENV183538474
OOAH01006028
284742
Bacillota
GAA
Phe
>WENV183538100
OOAH01001446
398832
Bacillota
TTC
Glu
>WENV183538288
OOAH01002642
398832
Bacillota
TTC
Glu
>WENV183538413
OOAH01004629
118669
Bacillota
GTA
Tyr
>WENV183538730
OOAH01039750
20943
Bacillota
CGA
Ser
>WENV183537521
OOAH01000107
280462
Bacillota
GAA
Phe
>WENV183537324
OOAH01000001
398852
Bacillota
CTC
Glu
>WENV183537390
OOAH01000030
398852
Bacillota
CTC
Glu
>WENV183537391
OOAH01000030
398852
Bacillota
CTC
Glu
>WENV183537392
OOAH01000030
398852
Bacillota
CTC
Glu
>WENV183537506
OOAH01000097
398852
Bacillota
CTC
Glu
>WENV183538174
OOAH01001827
398852
Bacillota
CTC
Glu
>WENV183537569
OOAH01000164
309916
Bacillota
TTT
Lys
>WENV183537589
OOAH01000183
289123
Bacillota
GGT
Thr
>WENV183537617
OOAH01000216
175857
Bacillota
GTG
His
>WENV183537890
OOAH01000716
285756
Bacillota
GCC
Gly
>WENV183537850
OOAH01000633
398833
Bacillota
TGT
Thr
>WENV183538032
OOAH01001128
398833
Bacillota
TGT
Thr
>WENV183538228
OOAH01002125
398833
Bacillota
TGT
Thr
>WENV183538246
OOAH01002217
398833
Bacillota
TGT
Thr
>WENV183537619
OOAH01000216
280463
Bacillota
TTT
Lys
>WENV183537441
OOAH01000060
405393
Bacillota
GCC
Gly
>WENV183538135
OOAH01001543
56074
Bacillota
TGA
Ser
>WENV183538316
OOAH01002919
280473
Bacillota
TGG
Pro
>WENV183538377
OOAH01003926
280473
Bacillota
TGG
Pro
>WENV183538563
OOAH01009258
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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