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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
27 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183541601
OOAL01001113
99852
Bacillota
GTA
Tyr
>WENV183541690
OOAL01011646
280500
Bacillota
TGC
Ala
>WENV183541596
OOAL01001081
349107
Bacillota
GCC
Gly
>WENV183541599
OOAL01001081
349107
Bacillota
GCC
Gly
>WENV183541600
OOAL01001081
405363
Bacillota
GCA
Cys
>WENV183541595
OOAL01001081
280428
Bacillota
GAA
Phe
>WENV183541649
OOAL01005299
229015
Bacillota
GTG
His
>WENV183541597
OOAL01001081
280466
Bacillota
TAC
Val
>WENV183541528
OOAL01000138
175842
Bacillota
CAC
Val
>WENV183541610
OOAL01001278
190476
Bacillota
CAT
Met
>WENV183541602
OOAL01001114
280447
Bacillota
GAC
Val
>WENV183541612
OOAL01001344
175831
Bacillota
ACG
Arg
>WENV183541689
OOAL01011646
175916
Bacillota
GAT
Ile
>WENV183541565
OOAL01000628
480322
Bacillota
CTG
Gln
>WENV183541532
OOAL01000159
175868
Bacillota
GTT
Asn
>WENV183541619
OOAL01002374
398854
Bacillota
CTC
Glu
>WENV183541585
OOAL01001027
291576
Bacillota
CCC
Gly
>WENV183541572
OOAL01000807
480324
Bacillota
TTG
Gln
>WENV183541623
OOAL01002512
280444
Bacillota
GGT
Thr
>WENV183541700
OOAL01013987
179755
Bacillota
CCG
Arg
>WENV183541611
OOAL01001278
398832
Bacillota
TTC
Glu
>WENV183541662
OOAL01006733
280462
Bacillota
GAA
Phe
>WENV183541695
OOAL01012846
398852
Bacillota
CTC
Glu
>WENV183541538
OOAL01000220
398833
Bacillota
TGT
Thr
>WENV183541598
OOAL01001081
175849
Bacillota
GTC
Asp
>WENV183541663
OOAL01006733
280463
Bacillota
TTT
Lys
>WENV183541563
OOAL01000568
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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