This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
68 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183543540
OOAN01029003
175831
Bacillota
ACG
Arg
>WENV183543441
OOAN01014161
175842
Bacillota
CAC
Val
>WENV183543134
OOAN01001326
73664
Bacillota
CAG
Leu
>WENV183543080
OOAN01000944
73009
Bacillota
CAG
Leu
>WENV183543237
OOAN01002793
73009
Bacillota
CAG
Leu
>WENV183543437
OOAN01013624
215243
Bacillota
CAT
Met
>WENV183543027
OOAN01000615
190476
Bacillota
CAT
Met
>WENV183543321
OOAN01005798
497729
Bacillota
CCA
Trp
>WENV183542937
OOAN01000299
291576
Bacillota
CCC
Gly
>WENV183543033
OOAN01000672
291576
Bacillota
CCC
Gly
>WENV183543285
OOAN01004344
291576
Bacillota
CCC
Gly
>WENV183543020
OOAN01000587
483485
Bacillota
CCC
Gly
>WENV183543174
OOAN01001611
179755
Bacillota
CCG
Arg
>WENV183542935
OOAN01000296
291581
Bacillota
CGG
Pro
>WENV183543171
OOAN01001560
291581
Bacillota
CGG
Pro
>WENV183543295
OOAN01004422
291581
Bacillota
CGG
Pro
>WENV183543442
OOAN01014204
398852
Bacillota
CTC
Glu
>WENV183542934
OOAN01000296
480322
Bacillota
CTG
Gln
>WENV183543170
OOAN01001560
480322
Bacillota
CTG
Gln
>WENV183543219
OOAN01002349
480322
Bacillota
CTG
Gln
>WENV183543294
OOAN01004422
480322
Bacillota
CTG
Gln
>WENV183542927
OOAN01000271
280428
Bacillota
GAA
Phe
>WENV183543001
OOAN01000548
284627
Bacillota
GAA
Phe
>WENV183542900
OOAN01000194
291634
Bacillota
GAA
Phe
>WENV183543222
OOAN01002535
280447
Bacillota
GAC
Val
>WENV183543252
OOAN01003154
280447
Bacillota
GAC
Val
>WENV183543269
OOAN01003622
280447
Bacillota
GAC
Val
>WENV183543329
OOAN01006110
175825
Bacillota
GAT
Ile
>WENV183543467
OOAN01017503
175916
Bacillota
GAT
Ile
>WENV183543537
OOAN01028583
201856
Bacillota
GAT
Ile
>WENV183543151
OOAN01001477
405363
Bacillota
GCA
Cys
>WENV183542986
OOAN01000463
343590
Bacillota
GCC
Gly
>WENV183542928
OOAN01000271
349107
Bacillota
GCC
Gly
>WENV183543223
OOAN01002545
349107
Bacillota
GCC
Gly
>WENV183543276
OOAN01003810
349107
Bacillota
GCC
Gly
>WENV183542947
OOAN01000331
405393
Bacillota
GCC
Gly
>WENV183542981
OOAN01000448
5692
Bacillota
GCT
Ser
>WENV183543253
OOAN01003182
312274
Bacillota
GGC
Ala
>WENV183543256
OOAN01003279
280444
Bacillota
GGT
Thr
>WENV183543458
OOAN01016482
289123
Bacillota
GGT
Thr
>WENV183542999
OOAN01000548
118669
Bacillota
GTA
Tyr
>WENV183543487
OOAN01019851
118669
Bacillota
GTA
Tyr
>WENV183542899
OOAN01000194
186123
Bacillota
GTC
Asp
>WENV183543160
OOAN01001524
175847
Bacillota
GTC
Asp
>WENV183543574
OOAN01041848
175849
Bacillota
GTC
Asp
>WENV183543473
OOAN01018376
298260
Bacillota
GTT
Asn
>WENV183543162
OOAN01001524
82124
Bacillota
TAA
Leu
>WENV183542884
OOAN01000155
510477
Bacillota
TCC
Gly
>WENV183542970
OOAN01000415
175859
Bacillota
TCT
Arg
>WENV183543273
OOAN01003759
175859
Bacillota
TCT
Arg
>WENV183543489
OOAN01020020
175859
Bacillota
TCT
Arg
>WENV183542980
OOAN01000448
56074
Bacillota
TGA
Ser
>WENV183543468
OOAN01017503
280500
Bacillota
TGC
Ala
>WENV183543328
OOAN01006110
280436
Bacillota
TGC
Ala
>WENV183543538
OOAN01028583
292374
Bacillota
TGC
Ala
>WENV183543464
OOAN01016772
280486
Bacillota
TGC
Ala
>WENV183543078
OOAN01000931
280473
Bacillota
TGG
Pro
>WENV183543132
OOAN01001285
280473
Bacillota
TGG
Pro
>WENV183543455
OOAN01016482
332181
Bacillota
TGT
Thr
>WENV183543245
OOAN01002941
398833
Bacillota
TGT
Thr
>WENV183543257
OOAN01003359
398857
Bacillota
TTC
Glu
>WENV183543028
OOAN01000615
398832
Bacillota
TTC
Glu
>WENV183543177
OOAN01001670
398832
Bacillota
TTC
Glu
>WENV183543029
OOAN01000627
480324
Bacillota
TTG
Gln
>WENV183543152
OOAN01001477
480324
Bacillota
TTG
Gln
>WENV183543169
OOAN01001560
480324
Bacillota
TTG
Gln
>WENV183543212
OOAN01002260
480324
Bacillota
TTG
Gln
>WENV183543240
OOAN01002871
346451
Bacillota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
BACK