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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
78 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183543859
OOAO01000210
510477
Bacillota
TCC
Gly
>WENV183544469
OOAO01003526
99852
Bacillota
GTA
Tyr
>WENV183544589
OOAO01006109
99852
Bacillota
GTA
Tyr
>WENV183544660
OOAO01010183
280500
Bacillota
TGC
Ala
>WENV183544240
OOAO01001434
405363
Bacillota
GCA
Cys
>WENV183544347
OOAO01002286
290391
Bacillota
TAC
Val
>WENV183544824
OOAO01037587
280428
Bacillota
GAA
Phe
>WENV183544092
OOAO01000746
229015
Bacillota
GTG
His
>WENV183543681
OOAO01000053
280492
Bacillota
CTT
Lys
>WENV183543864
OOAO01000219
280492
Bacillota
CTT
Lys
>WENV183543798
OOAO01000152
175842
Bacillota
CAC
Val
>WENV183543819
OOAO01000169
291629
Bacillota
CCA
Trp
>WENV183544033
OOAO01000573
184497
Bacillota
GGG
Pro
>WENV183544376
OOAO01002522
184497
Bacillota
GGG
Pro
>WENV183544681
OOAO01012212
179176
Bacillota
ACG
Arg
>WENV183544186
OOAO01001138
190476
Bacillota
CAT
Met
>WENV183544421
OOAO01002991
190476
Bacillota
CAT
Met
>WENV183543960
OOAO01000420
73664
Bacillota
CAG
Leu
>WENV183543796
OOAO01000152
280447
Bacillota
GAC
Val
>WENV183544569
OOAO01005455
280447
Bacillota
GAC
Val
>WENV183544149
OOAO01000967
5692
Bacillota
GCT
Ser
>WENV183544406
OOAO01002768
5692
Bacillota
GCT
Ser
>WENV183543816
OOAO01000167
312274
Bacillota
GGC
Ala
>WENV183543921
OOAO01000342
186123
Bacillota
GTC
Asp
>WENV183544245
OOAO01001474
73009
Bacillota
CAG
Leu
>WENV183544655
OOAO01010019
189473
Bacillota
GAT
Ile
>WENV183544593
OOAO01006160
291581
Bacillota
CGG
Pro
>WENV183544054
OOAO01000652
175859
Bacillota
TCT
Arg
>WENV183544466
OOAO01003514
175859
Bacillota
TCT
Arg
>WENV183544244
OOAO01001443
175831
Bacillota
ACG
Arg
>WENV183543730
OOAO01000093
332181
Bacillota
TGT
Thr
>WENV183544091
OOAO01000746
179810
Bacillota
TCT
Arg
>WENV183543922
OOAO01000342
291634
Bacillota
GAA
Phe
>WENV183543628
OOAO01000013
346451
Bacillota
TTT
Lys
>WENV183543677
OOAO01000052
346451
Bacillota
TTT
Lys
>WENV183544217
OOAO01001306
27216
Bacillota
GCT
Ser
>WENV183543961
OOAO01000421
27216
Bacillota
GCT
Ser
>WENV183543652
OOAO01000029
480322
Bacillota
CTG
Gln
>WENV183543834
OOAO01000190
480322
Bacillota
CTG
Gln
>WENV183544592
OOAO01006160
480322
Bacillota
CTG
Gln
>WENV183543900
OOAO01000296
175868
Bacillota
GTT
Asn
>WENV183544600
OOAO01006323
175868
Bacillota
GTT
Asn
>WENV183544599
OOAO01006323
398854
Bacillota
CTC
Glu
>WENV183544413
OOAO01002835
291576
Bacillota
CCC
Gly
>WENV183544239
OOAO01001434
480324
Bacillota
TTG
Gln
>WENV183544329
OOAO01002137
480324
Bacillota
TTG
Gln
>WENV183544047
OOAO01000617
497729
Bacillota
CCA
Trp
>WENV183543999
OOAO01000515
175899
Bacillota
GTC
Asp
>WENV183544454
OOAO01003360
303718
Bacillota
TGT
Thr
>WENV183544169
OOAO01001087
303718
Bacillota
TGT
Thr
>WENV183543958
OOAO01000420
56079
Bacillota
AAG
Leu
>WENV183543959
OOAO01000420
56079
Bacillota
AAG
Leu
>WENV183544752
OOAO01020304
292374
Bacillota
TGC
Ala
>WENV183544403
OOAO01002767
398857
Bacillota
TTC
Glu
>WENV183543933
OOAO01000367
117745
Bacillota
GTA
Tyr
>WENV183543725
OOAO01000089
46643
Bacillota
TGA
Ser
>WENV183544685
OOAO01012487
179755
Bacillota
CCG
Arg
>WENV183544187
OOAO01001138
398832
Bacillota
TTC
Glu
>WENV183544422
OOAO01002991
398832
Bacillota
TTC
Glu
>WENV183544202
OOAO01001233
280476
Bacillota
TTT
Lys
>WENV183543722
OOAO01000089
280462
Bacillota
GAA
Phe
>WENV183543747
OOAO01000102
398852
Bacillota
CTC
Glu
>WENV183544152
OOAO01000985
398852
Bacillota
CTC
Glu
>WENV183544163
OOAO01001030
398852
Bacillota
CTC
Glu
>WENV183544751
OOAO01020304
201856
Bacillota
GAT
Ile
>WENV183543733
OOAO01000093
289123
Bacillota
GGT
Thr
>WENV183544727
OOAO01017345
118370
Bacillota
TAG
Leu
>WENV183544006
OOAO01000515
175857
Bacillota
GTG
His
>WENV183544350
OOAO01002286
285756
Bacillota
GCC
Gly
>WENV183543942
OOAO01000388
398833
Bacillota
TGT
Thr
>WENV183544174
OOAO01001096
398833
Bacillota
TGT
Thr
>WENV183544266
OOAO01001560
285556
Bacillota
TGT
Thr
>WENV183544008
OOAO01000515
280463
Bacillota
TTT
Lys
>WENV183543663
OOAO01000038
405393
Bacillota
GCC
Gly
>WENV183544148
OOAO01000967
56074
Bacillota
TGA
Ser
>WENV183544405
OOAO01002768
56074
Bacillota
TGA
Ser
>WENV183543797
OOAO01000152
280473
Bacillota
TGG
Pro
>WENV183544516
OOAO01004100
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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