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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
45 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183550238
OOBB01000744
405363
Bacillota
GCA
Cys
>WENV183550234
OOBB01000744
280428
Bacillota
GAA
Phe
>WENV183550200
OOBB01000584
175842
Bacillota
CAC
Val
>WENV183550358
OOBB01002255
175842
Bacillota
CAC
Val
>WENV183550468
OOBB01006119
190476
Bacillota
CAT
Met
>WENV183550508
OOBB01010375
280447
Bacillota
GAC
Val
>WENV183550493
OOBB01007683
5692
Bacillota
GCT
Ser
>WENV183550274
OOBB01000940
73009
Bacillota
CAG
Leu
>WENV183550435
OOBB01004687
73009
Bacillota
CAG
Leu
>WENV183550368
OOBB01002621
291581
Bacillota
CGG
Pro
>WENV183550337
OOBB01001566
175859
Bacillota
TCT
Arg
>WENV183550384
OOBB01002993
175847
Bacillota
GTC
Asp
>WENV183550462
OOBB01005642
175831
Bacillota
ACG
Arg
>WENV183550566
OOBB01019394
294020
Bacillota
TAC
Val
>WENV183550367
OOBB01002621
480322
Bacillota
CTG
Gln
>WENV183550585
OOBB01023489
480322
Bacillota
CTG
Gln
>WENV183550207
OOBB01000612
175868
Bacillota
GTT
Asn
>WENV183550272
OOBB01000924
175868
Bacillota
GTT
Asn
>WENV183550327
OOBB01001383
175868
Bacillota
GTT
Asn
>WENV183550530
OOBB01013133
175868
Bacillota
GTT
Asn
>WENV183550607
OOBB01028478
322848
Bacillota
CTT
Lys
>WENV183550206
OOBB01000612
398854
Bacillota
CTC
Glu
>WENV183550326
OOBB01001383
398854
Bacillota
CTC
Glu
>WENV183550529
OOBB01013133
398854
Bacillota
CTC
Glu
>WENV183550606
OOBB01028478
398854
Bacillota
CTC
Glu
>WENV183550182
OOBB01000444
291576
Bacillota
CCC
Gly
>WENV183550227
OOBB01000671
480324
Bacillota
TTG
Gln
>WENV183550511
OOBB01010549
280444
Bacillota
GGT
Thr
>WENV183550235
OOBB01000744
321753
Bacillota
GCC
Gly
>WENV183550237
OOBB01000744
321753
Bacillota
GCC
Gly
>WENV183550313
OOBB01001256
321753
Bacillota
GCC
Gly
>WENV183550487
OOBB01007086
321753
Bacillota
GCC
Gly
>WENV183550528
OOBB01012751
179755
Bacillota
CCG
Arg
>WENV183550478
OOBB01006404
46835
Bacillota
TAA
Leu
>WENV183550469
OOBB01006119
398832
Bacillota
TTC
Glu
>WENV183550331
OOBB01001447
118669
Bacillota
GTA
Tyr
>WENV183550414
OOBB01004276
280476
Bacillota
TTT
Lys
>WENV183550452
OOBB01005112
280483
Bacillota
GAA
Phe
>WENV183550603
OOBB01027520
285601
Bacillota
TTC
Glu
>WENV183550453
OOBB01005112
285756
Bacillota
GCC
Gly
>WENV183550430
OOBB01004602
398833
Bacillota
TGT
Thr
>WENV183550236
OOBB01000744
175849
Bacillota
GTC
Asp
>WENV183550510
OOBB01010549
175849
Bacillota
GTC
Asp
>WENV183550492
OOBB01007683
56074
Bacillota
TGA
Ser
>WENV183550360
OOBB01002293
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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