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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
67 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183563688
OOBX01004924
200563
Bacillota
TGG
Pro
>WENV183563076
OOBX01000003
184537
Bacillota
ACG
Arg
>WENV183563159
OOBX01000013
408526
Bacillota
GCA
Cys
>WENV183563372
OOBX01000130
291579
Bacillota
GAA
Phe
>WENV183563607
OOBX01000905
291579
Bacillota
GAA
Phe
>WENV183563753
OOBX01009465
291579
Bacillota
GAA
Phe
>WENV183563727
OOBX01007553
179917
Bacillota
CAT
Met
>WENV183563205
OOBX01000034
296855
Bacillota
GGT
Thr
>WENV183563184
OOBX01000026
48505
Bacillota
TGA
Ser
>WENV183563416
OOBX01000171
184497
Bacillota
GGG
Pro
>WENV183563079
OOBX01000003
289717
Bacillota
CTT
Lys
>WENV183563686
OOBX01004924
176018
Bacillota
CAT
Met
>WENV183563701
OOBX01006543
398915
Bacillota
TTC
Glu
>WENV183563189
OOBX01000029
20932
Bacillota
GCT
Ser
>WENV183563157
OOBX01000013
291553
Bacillota
GAA
Phe
>WENV183563451
OOBX01000206
291553
Bacillota
GAA
Phe
>WENV183563161
OOBX01000013
482593
Bacillota
CCC
Gly
>WENV183563681
OOBX01004924
176014
Bacillota
TCT
Arg
>WENV183563330
OOBX01000106
20942
Bacillota
GGA
Ser
>WENV183563404
OOBX01000145
284723
Bacillota
TAC
Val
>WENV183563664
OOBX01002961
481217
Bacillota
GCA
Cys
>WENV183563722
OOBX01007450
400745
Bacillota
CCG
Arg
>WENV183563180
OOBX01000022
398835
Bacillota
GCC
Gly
>WENV183563206
OOBX01000034
184495
Bacillota
CAT
Met
>WENV183563081
OOBX01000003
141202
Bacillota
CAA
Leu
>WENV183563761
OOBX01011051
303871
Bacillota
CTC
Glu
>WENV183563202
OOBX01000034
289713
Bacillota
TGT
Thr
>WENV183563217
OOBX01000034
404091
Bacillota
TTG
Gln
>WENV183563659
OOBX01002569
484885
Bacillota
TCC
Gly
>WENV183563127
OOBX01000007
187364
Bacillota
CAT
Met
>WENV183563389
OOBX01000137
401685
Bacillota
TTG
Gln
>WENV183563216
OOBX01000034
289716
Bacillota
GTG
His
>WENV183563733
OOBX01008170
119278
Bacillota
TAG
Leu
>WENV183563625
OOBX01001256
179546
Bacillota
CAT
Met
>WENV183563120
OOBX01000007
73638
Bacillota
AAG
Leu
>WENV183563454
OOBX01000206
480337
Bacillota
TCC
Gly
>WENV183563498
OOBX01000288
398857
Bacillota
TTC
Glu
>WENV183563741
OOBX01008728
398857
Bacillota
TTC
Glu
>WENV183563077
OOBX01000003
119459
Bacillota
TAG
Leu
>WENV183563651
OOBX01002147
291597
Bacillota
TGC
Ala
>WENV183563156
OOBX01000013
280547
Bacillota
GTC
Asp
>WENV183563329
OOBX01000106
280547
Bacillota
GTC
Asp
>WENV183563702
OOBX01006543
486506
Bacillota
TCC
Gly
>WENV183563527
OOBX01000381
58120
Bacillota
AAG
Leu
>WENV183563209
OOBX01000034
289761
Bacillota
TTT
Lys
>WENV183563218
OOBX01000034
289761
Bacillota
TTT
Lys
>WENV183563164
OOBX01000014
46835
Bacillota
TAA
Leu
>WENV183563546
OOBX01000465
46835
Bacillota
TAA
Leu
>WENV183563718
OOBX01007126
175915
Bacillota
GTC
Asp
>WENV183563723
OOBX01007553
175915
Bacillota
GTC
Asp
>WENV183563201
OOBX01000034
289715
Bacillota
TAC
Val
>WENV183563211
OOBX01000034
289715
Bacillota
TAC
Val
>WENV183563215
OOBX01000034
289715
Bacillota
TAC
Val
>WENV183563608
OOBX01000905
280476
Bacillota
TTT
Lys
>WENV183563644
OOBX01001698
280476
Bacillota
TTT
Lys
>WENV183563456
OOBX01000206
20943
Bacillota
CGA
Ser
>WENV183563390
OOBX01000137
309916
Bacillota
TTT
Lys
>WENV183563754
OOBX01009465
309916
Bacillota
TTT
Lys
>WENV183563725
OOBX01007553
118359
Bacillota
GTA
Tyr
>WENV183563453
OOBX01000206
208539
Bacillota
TGG
Pro
>WENV183563126
OOBX01000007
321248
Bacillota
TAC
Val
>WENV183563353
OOBX01000123
321248
Bacillota
TAC
Val
>WENV183563595
OOBX01000742
321248
Bacillota
TAC
Val
>WENV183563724
OOBX01007553
321248
Bacillota
TAC
Val
>WENV183563455
OOBX01000206
184539
Bacillota
TCT
Arg
>WENV183563388
OOBX01000137
175857
Bacillota
GTG
His
>WENV183563641
OOBX01001698
179166
Bacillota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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