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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
81 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183564686
OOBZ01000139
510477
Bacillota
TCC
Gly
>WENV183565911
OOBZ01046919
343590
Bacillota
GCC
Gly
>WENV183565969
OOBZ01062152
280500
Bacillota
TGC
Ala
>WENV183564950
OOBZ01001032
405363
Bacillota
GCA
Cys
>WENV183564712
OOBZ01000182
280428
Bacillota
GAA
Phe
>WENV183566025
OOBZ01088596
480359
Bacillota
TCC
Gly
>WENV183565273
OOBZ01004332
175842
Bacillota
CAC
Val
>WENV183565354
OOBZ01005675
175842
Bacillota
CAC
Val
>WENV183565747
OOBZ01024382
175842
Bacillota
CAC
Val
>WENV183564597
OOBZ01000022
291629
Bacillota
CCA
Trp
>WENV183565653
OOBZ01016180
184497
Bacillota
GGG
Pro
>WENV183566007
OOBZ01080166
176018
Bacillota
CAT
Met
>WENV183565930
OOBZ01051904
179563
Bacillota
GAT
Ile
>WENV183565488
OOBZ01009275
179176
Bacillota
ACG
Arg
>WENV183564719
OOBZ01000187
295166
Bacillota
TGC
Ala
>WENV183565143
OOBZ01002353
280447
Bacillota
GAC
Val
>WENV183565271
OOBZ01004288
280447
Bacillota
GAC
Val
>WENV183565676
OOBZ01017752
280447
Bacillota
GAC
Val
>WENV183565746
OOBZ01024291
280447
Bacillota
GAC
Val
>WENV183564801
OOBZ01000364
5692
Bacillota
GCT
Ser
>WENV183564680
OOBZ01000139
186123
Bacillota
GTC
Asp
>WENV183564749
OOBZ01000275
186123
Bacillota
GTC
Asp
>WENV183564710
OOBZ01000182
280427
Bacillota
TAC
Val
>WENV183565029
OOBZ01001457
73009
Bacillota
CAG
Leu
>WENV183565487
OOBZ01009231
73009
Bacillota
CAG
Leu
>WENV183565859
OOBZ01037494
481217
Bacillota
GCA
Cys
>WENV183565819
OOBZ01032348
189473
Bacillota
GAT
Ile
>WENV183565275
OOBZ01004347
291581
Bacillota
CGG
Pro
>WENV183565313
OOBZ01005097
291581
Bacillota
CGG
Pro
>WENV183565302
OOBZ01004996
175859
Bacillota
TCT
Arg
>WENV183565929
OOBZ01051904
353153
Bacillota
TGC
Ala
>WENV183564876
OOBZ01000633
284627
Bacillota
GAA
Phe
>WENV183564681
OOBZ01000139
291634
Bacillota
GAA
Phe
>WENV183564750
OOBZ01000275
291634
Bacillota
GAA
Phe
>WENV183564816
OOBZ01000438
346451
Bacillota
TTT
Lys
>WENV183564942
OOBZ01000995
346451
Bacillota
TTT
Lys
>WENV183565142
OOBZ01002349
27216
Bacillota
GCT
Ser
>WENV183565924
OOBZ01050471
484885
Bacillota
TCC
Gly
>WENV183564991
OOBZ01001241
480322
Bacillota
CTG
Gln
>WENV183565084
OOBZ01001816
480322
Bacillota
CTG
Gln
>WENV183565274
OOBZ01004347
480322
Bacillota
CTG
Gln
>WENV183565312
OOBZ01005097
480322
Bacillota
CTG
Gln
>WENV183565425
OOBZ01007718
480322
Bacillota
CTG
Gln
>WENV183565196
OOBZ01003000
175868
Bacillota
GTT
Asn
>WENV183565639
OOBZ01015437
398854
Bacillota
CTC
Glu
>WENV183565015
OOBZ01001356
291576
Bacillota
CCC
Gly
>WENV183565077
OOBZ01001767
291576
Bacillota
CCC
Gly
>WENV183565416
OOBZ01007558
291576
Bacillota
CCC
Gly
>WENV183565445
OOBZ01008326
480324
Bacillota
TTG
Gln
>WENV183565888
OOBZ01042304
497729
Bacillota
CCA
Trp
>WENV183565553
OOBZ01011837
303718
Bacillota
TGT
Thr
>WENV183565581
OOBZ01012409
303718
Bacillota
TGT
Thr
>WENV183565880
OOBZ01040578
186051
Bacillota
GAT
Ile
>WENV183565343
OOBZ01005453
280444
Bacillota
GGT
Thr
>WENV183565345
OOBZ01005453
280444
Bacillota
GGT
Thr
>WENV183565573
OOBZ01012168
280444
Bacillota
GGT
Thr
>WENV183565363
OOBZ01005885
280444
Bacillota
GGT
Thr
>WENV183565423
OOBZ01007668
280444
Bacillota
GGT
Thr
>WENV183565447
OOBZ01008365
280444
Bacillota
GGT
Thr
>WENV183565605
OOBZ01013319
223045
Bacillota
GAT
Ile
>WENV183565121
OOBZ01002151
179755
Bacillota
CCG
Arg
>WENV183565710
OOBZ01021211
179755
Bacillota
CCG
Arg
>WENV183565366
OOBZ01005920
118669
Bacillota
GTA
Tyr
>WENV183565508
OOBZ01010469
175915
Bacillota
GTC
Asp
>WENV183565766
OOBZ01025996
52748
Bacillota
TGA
Ser
>WENV183565377
OOBZ01006449
280476
Bacillota
TTT
Lys
>WENV183565571
OOBZ01012102
398852
Bacillota
CTC
Glu
>WENV183564764
OOBZ01000293
289123
Bacillota
GGT
Thr
>WENV183564768
OOBZ01000293
289123
Bacillota
GGT
Thr
>WENV183564687
OOBZ01000139
184539
Bacillota
TCT
Arg
>WENV183565920
OOBZ01048875
285601
Bacillota
TTC
Glu
>WENV183565323
OOBZ01005267
398833
Bacillota
TGT
Thr
>WENV183565344
OOBZ01005453
175849
Bacillota
GTC
Asp
>WENV183565422
OOBZ01007668
175849
Bacillota
GTC
Asp
>WENV183565996
OOBZ01075307
280486
Bacillota
TGC
Ala
>WENV183564682
OOBZ01000139
405393
Bacillota
GCC
Gly
>WENV183564851
OOBZ01000543
405393
Bacillota
GCC
Gly
>WENV183564800
OOBZ01000364
56074
Bacillota
TGA
Ser
>WENV183566028
OOBZ01088596
443965
Bacillota
>WENV183565619
OOBZ01013881
280473
Bacillota
TGG
Pro
>WENV183565674
OOBZ01017744
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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