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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
98 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183566568
OOCA01005916
510477
Bacillota
TCC
Gly
>WENV183566351
OOCA01000755
99852
Bacillota
GTA
Tyr
>WENV183566358
OOCA01000770
99852
Bacillota
GTA
Tyr
>WENV183566214
OOCA01000201
349107
Bacillota
GCC
Gly
>WENV183566218
OOCA01000201
349107
Bacillota
GCC
Gly
>WENV183566262
OOCA01000321
349107
Bacillota
GCC
Gly
>WENV183566328
OOCA01000624
349107
Bacillota
GCC
Gly
>WENV183566330
OOCA01000624
349107
Bacillota
GCC
Gly
>WENV183566354
OOCA01000770
349107
Bacillota
GCC
Gly
>WENV183566356
OOCA01000770
349107
Bacillota
GCC
Gly
>WENV183566331
OOCA01000624
405363
Bacillota
GCA
Cys
>WENV183566357
OOCA01000770
405363
Bacillota
GCA
Cys
>WENV183566217
OOCA01000201
280428
Bacillota
GAA
Phe
>WENV183566261
OOCA01000321
280428
Bacillota
GAA
Phe
>WENV183566327
OOCA01000624
280428
Bacillota
GAA
Phe
>WENV183566353
OOCA01000770
280428
Bacillota
GAA
Phe
>WENV183566661
OOCA01019590
480359
Bacillota
TCC
Gly
>WENV183566215
OOCA01000201
280466
Bacillota
TAC
Val
>WENV183566171
OOCA01000115
175842
Bacillota
CAC
Val
>WENV183566512
OOCA01003412
175842
Bacillota
CAC
Val
>WENV183566376
OOCA01000901
291629
Bacillota
CCA
Trp
>WENV183566482
OOCA01002329
184497
Bacillota
GGG
Pro
>WENV183566665
OOCA01019590
298270
Bacillota
TAC
Val
>WENV183566683
OOCA01022813
176018
Bacillota
CAT
Met
>WENV183566466
OOCA01001661
179176
Bacillota
ACG
Arg
>WENV183566602
OOCA01008360
215243
Bacillota
CAT
Met
>WENV183566223
OOCA01000209
190476
Bacillota
CAT
Met
>WENV183566372
OOCA01000891
190476
Bacillota
CAT
Met
>WENV183566190
OOCA01000155
280447
Bacillota
GAC
Val
>WENV183566201
OOCA01000176
280447
Bacillota
GAC
Val
>WENV183566273
OOCA01000389
280447
Bacillota
GAC
Val
>WENV183566350
OOCA01000754
280447
Bacillota
GAC
Val
>WENV183566049
OOCA01000004
5692
Bacillota
GCT
Ser
>WENV183566203
OOCA01000176
5692
Bacillota
GCT
Ser
>WENV183566574
OOCA01006226
312274
Bacillota
GGC
Ala
>WENV183566374
OOCA01000901
186123
Bacillota
GTC
Asp
>WENV183566394
OOCA01000997
186123
Bacillota
GTC
Asp
>WENV183566415
OOCA01001113
186123
Bacillota
GTC
Asp
>WENV183566172
OOCA01000115
73009
Bacillota
CAG
Leu
>WENV183566205
OOCA01000189
73009
Bacillota
CAG
Leu
>WENV183566713
OOCA01032702
73009
Bacillota
CAG
Leu
>WENV183566603
OOCA01008360
460732
Bacillota
TTC
Glu
>WENV183566709
OOCA01031220
280646
Bacillota
TGC
Ala
>WENV183566136
OOCA01000064
291581
Bacillota
CGG
Pro
>WENV183566431
OOCA01001206
291581
Bacillota
CGG
Pro
>WENV183566125
OOCA01000052
175859
Bacillota
TCT
Arg
>WENV183566667
OOCA01019590
280641
Bacillota
GTT
Asn
>WENV183566420
OOCA01001140
332181
Bacillota
TGT
Thr
>WENV183566377
OOCA01000906
291634
Bacillota
GAA
Phe
>WENV183566395
OOCA01000997
291634
Bacillota
GAA
Phe
>WENV183566370
OOCA01000864
346451
Bacillota
TTT
Lys
>WENV183566043
OOCA01000002
480322
Bacillota
CTG
Gln
>WENV183566135
OOCA01000064
480322
Bacillota
CTG
Gln
>WENV183566181
OOCA01000138
480322
Bacillota
CTG
Gln
>WENV183566430
OOCA01001206
480322
Bacillota
CTG
Gln
>WENV183566585
OOCA01006702
401685
Bacillota
TTG
Gln
>WENV183566047
OOCA01000004
175868
Bacillota
GTT
Asn
>WENV183566163
OOCA01000093
175868
Bacillota
GTT
Asn
>WENV183566208
OOCA01000190
175868
Bacillota
GTT
Asn
>WENV183566259
OOCA01000321
175868
Bacillota
GTT
Asn
>WENV183566046
OOCA01000004
398854
Bacillota
CTC
Glu
>WENV183566122
OOCA01000052
398854
Bacillota
CTC
Glu
>WENV183566207
OOCA01000190
398854
Bacillota
CTC
Glu
>WENV183566705
OOCA01028417
398854
Bacillota
CTC
Glu
>WENV183566264
OOCA01000345
291576
Bacillota
CCC
Gly
>WENV183566134
OOCA01000064
480324
Bacillota
TTG
Gln
>WENV183566326
OOCA01000624
480324
Bacillota
TTG
Gln
>WENV183566493
OOCA01002711
497729
Bacillota
CCA
Trp
>WENV183566562
OOCA01005628
175911
Bacillota
GTC
Asp
>WENV183566660
OOCA01019508
292374
Bacillota
TGC
Ala
>WENV183566277
OOCA01000405
280444
Bacillota
GGT
Thr
>WENV183566279
OOCA01000405
280444
Bacillota
GGT
Thr
>WENV183566289
OOCA01000428
280444
Bacillota
GGT
Thr
>WENV183566290
OOCA01000428
280444
Bacillota
GGT
Thr
>WENV183566701
OOCA01028016
291597
Bacillota
TGC
Ala
>WENV183566337
OOCA01000646
179755
Bacillota
CCG
Arg
>WENV183566224
OOCA01000209
398832
Bacillota
TTC
Glu
>WENV183566373
OOCA01000891
398832
Bacillota
TTC
Glu
>WENV183566610
OOCA01008952
118669
Bacillota
GTA
Tyr
>WENV183566533
OOCA01003994
175915
Bacillota
GTC
Asp
>WENV183566219
OOCA01000202
52748
Bacillota
TGA
Ser
>WENV183566656
OOCA01019068
398852
Bacillota
CTC
Glu
>WENV183566659
OOCA01019508
201856
Bacillota
GAT
Ile
>WENV183566423
OOCA01001140
289123
Bacillota
GGT
Thr
>WENV183566649
OOCA01018191
360353
Bacillota
CTT
Lys
>WENV183566584
OOCA01006702
175857
Bacillota
GTG
His
>WENV183566144
OOCA01000072
398833
Bacillota
TGT
Thr
>WENV183566216
OOCA01000201
175849
Bacillota
GTC
Asp
>WENV183566278
OOCA01000405
175849
Bacillota
GTC
Asp
>WENV183566288
OOCA01000428
175849
Bacillota
GTC
Asp
>WENV183566329
OOCA01000624
175849
Bacillota
GTC
Asp
>WENV183566355
OOCA01000770
175849
Bacillota
GTC
Asp
>WENV183566375
OOCA01000901
405393
Bacillota
GCC
Gly
>WENV183566378
OOCA01000906
405393
Bacillota
GCC
Gly
>WENV183566048
OOCA01000004
56074
Bacillota
TGA
Ser
>WENV183566202
OOCA01000176
56074
Bacillota
TGA
Ser
>WENV183566317
OOCA01000549
280473
Bacillota
TGG
Pro
>WENV183566359
OOCA01000771
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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