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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
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|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
264 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183566827
OOCB01000024
510477
Bacillota
TCC
Gly
>WENV183569581
OOCB01084625
377363
Bacillota
GAA
Phe
>WENV183569478
OOCB01055944
212982
Bacillota
ACG
Arg
>WENV183568129
OOCB01002017
343590
Bacillota
GCC
Gly
>WENV183569019
OOCB01012006
343590
Bacillota
GCC
Gly
>WENV183569033
OOCB01012579
343590
Bacillota
GCC
Gly
>WENV183569353
OOCB01031255
280500
Bacillota
TGC
Ala
>WENV183569395
OOCB01039401
280500
Bacillota
TGC
Ala
>WENV183569457
OOCB01052705
280500
Bacillota
TGC
Ala
>WENV183569500
OOCB01062146
280500
Bacillota
TGC
Ala
>WENV183567264
OOCB01000322
349107
Bacillota
GCC
Gly
>WENV183567415
OOCB01000478
349107
Bacillota
GCC
Gly
>WENV183567537
OOCB01000599
349107
Bacillota
GCC
Gly
>WENV183567644
OOCB01000755
349107
Bacillota
GCC
Gly
>WENV183568036
OOCB01001742
349107
Bacillota
GCC
Gly
>WENV183568039
OOCB01001755
349107
Bacillota
GCC
Gly
>WENV183568773
OOCB01006684
349107
Bacillota
GCC
Gly
>WENV183568775
OOCB01006684
349107
Bacillota
GCC
Gly
>WENV183569210
OOCB01020055
349107
Bacillota
GCC
Gly
>WENV183568776
OOCB01006684
405363
Bacillota
GCA
Cys
>WENV183567390
OOCB01000452
290391
Bacillota
TAC
Val
>WENV183567263
OOCB01000322
280428
Bacillota
GAA
Phe
>WENV183568772
OOCB01006684
280428
Bacillota
GAA
Phe
>WENV183568795
OOCB01006966
141454
Bacillota
TAG
Leu
>WENV183568789
OOCB01006966
480359
Bacillota
TCC
Gly
>WENV183567129
OOCB01000190
229015
Bacillota
GTG
His
>WENV183568541
OOCB01004108
229015
Bacillota
GTG
His
>WENV183567346
OOCB01000395
179917
Bacillota
CAT
Met
>WENV183568764
OOCB01006614
179917
Bacillota
CAT
Met
>WENV183567456
OOCB01000515
302145
Bacillota
GAA
Phe
>WENV183568243
OOCB01002460
302145
Bacillota
GAA
Phe
>WENV183569007
OOCB01011614
280466
Bacillota
TAC
Val
>WENV183569282
OOCB01025723
280466
Bacillota
TAC
Val
>WENV183567208
OOCB01000276
280492
Bacillota
CTT
Lys
>WENV183567565
OOCB01000646
280492
Bacillota
CTT
Lys
>WENV183568133
OOCB01002049
280492
Bacillota
CTT
Lys
>WENV183567811
OOCB01001122
175842
Bacillota
CAC
Val
>WENV183569232
OOCB01021253
175842
Bacillota
CAC
Val
>WENV183569532
OOCB01070420
280639
Bacillota
TTT
Lys
>WENV183566920
OOCB01000062
291629
Bacillota
CCA
Trp
>WENV183569477
OOCB01055944
46774
Bacillota
TAA
Leu
>WENV183568691
OOCB01005610
287289
Bacillota
GCC
Gly
>WENV183566816
OOCB01000020
184497
Bacillota
GGG
Pro
>WENV183568939
OOCB01009837
184497
Bacillota
GGG
Pro
>WENV183569170
OOCB01017987
184497
Bacillota
GGG
Pro
>WENV183568790
OOCB01006966
298270
Bacillota
TAC
Val
>WENV183569535
OOCB01070420
176018
Bacillota
CAT
Met
>WENV183569102
OOCB01015434
194260
Bacillota
GAT
Ile
>WENV183567005
OOCB01000116
179176
Bacillota
ACG
Arg
>WENV183567834
OOCB01001169
179176
Bacillota
ACG
Arg
>WENV183569026
OOCB01012115
179176
Bacillota
ACG
Arg
>WENV183568787
OOCB01006963
352588
Bacillota
CAT
Met
>WENV183568831
OOCB01007620
215243
Bacillota
CAT
Met
>WENV183568901
OOCB01008973
215243
Bacillota
CAT
Met
>WENV183567257
OOCB01000318
190476
Bacillota
CAT
Met
>WENV183567405
OOCB01000463
190476
Bacillota
CAT
Met
>WENV183568457
OOCB01003531
190476
Bacillota
CAT
Met
>WENV183568654
OOCB01005110
190476
Bacillota
CAT
Met
>WENV183568670
OOCB01005337
190476
Bacillota
CAT
Met
>WENV183569183
OOCB01018838
82124
Bacillota
TAA
Leu
>WENV183568796
OOCB01006966
398916
Bacillota
>WENV183567544
OOCB01000613
73664
Bacillota
CAG
Leu
>WENV183567754
OOCB01000950
73664
Bacillota
CAG
Leu
>WENV183568160
OOCB01002151
280447
Bacillota
GAC
Val
>WENV183568324
OOCB01002885
280447
Bacillota
GAC
Val
>WENV183568350
OOCB01003008
280447
Bacillota
GAC
Val
>WENV183568949
OOCB01010094
280447
Bacillota
GAC
Val
>WENV183567810
OOCB01001122
280447
Bacillota
GAC
Val
>WENV183568004
OOCB01001663
280447
Bacillota
GAC
Val
>WENV183568131
OOCB01002037
280447
Bacillota
GAC
Val
>WENV183566899
OOCB01000050
5692
Bacillota
GCT
Ser
>WENV183567768
OOCB01000998
5692
Bacillota
GCT
Ser
>WENV183568420
OOCB01003302
5692
Bacillota
GCT
Ser
>WENV183568824
OOCB01007499
5692
Bacillota
GCT
Ser
>WENV183567143
OOCB01000200
312274
Bacillota
GGC
Ala
>WENV183566918
OOCB01000062
186123
Bacillota
GTC
Asp
>WENV183566922
OOCB01000062
186123
Bacillota
GTC
Asp
>WENV183567343
OOCB01000395
284723
Bacillota
TAC
Val
>WENV183567380
OOCB01000430
284723
Bacillota
TAC
Val
>WENV183567556
OOCB01000626
284723
Bacillota
TAC
Val
>WENV183567826
OOCB01001162
284723
Bacillota
TAC
Val
>WENV183567924
OOCB01001427
284723
Bacillota
TAC
Val
>WENV183568596
OOCB01004581
284723
Bacillota
TAC
Val
>WENV183567439
OOCB01000494
73009
Bacillota
CAG
Leu
>WENV183567824
OOCB01001157
73009
Bacillota
CAG
Leu
>WENV183568443
OOCB01003367
73009
Bacillota
CAG
Leu
>WENV183569013
OOCB01011816
481217
Bacillota
GCA
Cys
>WENV183568788
OOCB01006966
280646
Bacillota
TGC
Ala
>WENV183569054
OOCB01013253
407726
Bacillota
CTG
Gln
>WENV183567638
OOCB01000749
291581
Bacillota
CGG
Pro
>WENV183567649
OOCB01000757
291581
Bacillota
CGG
Pro
>WENV183568223
OOCB01002385
291581
Bacillota
CGG
Pro
>WENV183568505
OOCB01003796
291581
Bacillota
CGG
Pro
>WENV183566809
OOCB01000017
457631
Bacillota
GCC
Gly
>WENV183567357
OOCB01000409
175859
Bacillota
TCT
Arg
>WENV183567961
OOCB01001509
175859
Bacillota
TCT
Arg
>WENV183568293
OOCB01002707
175859
Bacillota
TCT
Arg
>WENV183568623
OOCB01004871
175859
Bacillota
TCT
Arg
>WENV183569125
OOCB01016203
398835
Bacillota
GCC
Gly
>WENV183569235
OOCB01021681
175847
Bacillota
GTC
Asp
>WENV183569505
OOCB01062226
175847
Bacillota
GTC
Asp
>WENV183568792
OOCB01006966
280641
Bacillota
GTT
Asn
>WENV183566958
OOCB01000084
290325
Bacillota
GCC
Gly
>WENV183566991
OOCB01000107
290325
Bacillota
GCC
Gly
>WENV183568784
OOCB01006926
21311
Bacillota
GCT
Ser
>WENV183567933
OOCB01001443
175831
Bacillota
ACG
Arg
>WENV183569200
OOCB01019785
175831
Bacillota
ACG
Arg
>WENV183567421
OOCB01000485
332181
Bacillota
TGT
Thr
>WENV183568590
OOCB01004549
510876
Bacillota
GGT
Thr
>WENV183567128
OOCB01000190
179810
Bacillota
TCT
Arg
>WENV183567520
OOCB01000580
284627
Bacillota
GAA
Phe
>WENV183567626
OOCB01000738
284627
Bacillota
GAA
Phe
>WENV183568128
OOCB01002017
284627
Bacillota
GAA
Phe
>WENV183568197
OOCB01002290
284627
Bacillota
GAA
Phe
>WENV183569530
OOCB01070420
176015
Bacillota
TGG
Pro
>WENV183566923
OOCB01000062
291634
Bacillota
GAA
Phe
>WENV183566874
OOCB01000043
346451
Bacillota
TTT
Lys
>WENV183567271
OOCB01000327
346451
Bacillota
TTT
Lys
>WENV183569299
OOCB01027638
137739
Bacillota
TAG
Leu
>WENV183569634
OOCB01102961
176657
Bacillota
GTC
Asp
>WENV183568793
OOCB01006966
478081
Bacillota
TGT
Thr
>WENV183567297
OOCB01000353
27216
Bacillota
GCT
Ser
>WENV183567730
OOCB01000915
27216
Bacillota
GCT
Ser
>WENV183568525
OOCB01004000
27216
Bacillota
GCT
Ser
>WENV183567627
OOCB01000738
484885
Bacillota
TCC
Gly
>WENV183568833
OOCB01007621
484885
Bacillota
TCC
Gly
>WENV183566815
OOCB01000019
480322
Bacillota
CTG
Gln
>WENV183566829
OOCB01000026
480322
Bacillota
CTG
Gln
>WENV183567524
OOCB01000587
480322
Bacillota
CTG
Gln
>WENV183567637
OOCB01000749
480322
Bacillota
CTG
Gln
>WENV183567648
OOCB01000757
480322
Bacillota
CTG
Gln
>WENV183568222
OOCB01002385
480322
Bacillota
CTG
Gln
>WENV183568446
OOCB01003388
480322
Bacillota
CTG
Gln
>WENV183568504
OOCB01003796
480322
Bacillota
CTG
Gln
>WENV183568801
OOCB01007128
480322
Bacillota
CTG
Gln
>WENV183568827
OOCB01007520
480322
Bacillota
CTG
Gln
>WENV183569145
OOCB01017092
187364
Bacillota
CAT
Met
>WENV183567661
OOCB01000782
401685
Bacillota
TTG
Gln
>WENV183568862
OOCB01008189
401685
Bacillota
TTG
Gln
>WENV183569473
OOCB01055944
282867
Bacillota
TGT
Thr
>WENV183566892
OOCB01000050
175868
Bacillota
GTT
Asn
>WENV183567360
OOCB01000411
175868
Bacillota
GTT
Asn
>WENV183567589
OOCB01000681
175868
Bacillota
GTT
Asn
>WENV183567715
OOCB01000876
175868
Bacillota
GTT
Asn
>WENV183567817
OOCB01001135
175868
Bacillota
GTT
Asn
>WENV183568246
OOCB01002480
175868
Bacillota
GTT
Asn
>WENV183568718
OOCB01006044
175868
Bacillota
GTT
Asn
>WENV183569479
OOCB01055944
208754
Bacillota
TGG
Pro
>WENV183566812
OOCB01000017
505221
Bacillota
TCC
Gly
>WENV183566917
OOCB01000057
505221
Bacillota
TCC
Gly
>WENV183567973
OOCB01001532
505221
Bacillota
TCC
Gly
>WENV183568305
OOCB01002794
505221
Bacillota
TCC
Gly
>WENV183566891
OOCB01000050
398854
Bacillota
CTC
Glu
>WENV183567714
OOCB01000876
398854
Bacillota
CTC
Glu
>WENV183567816
OOCB01001135
398854
Bacillota
CTC
Glu
>WENV183568717
OOCB01006044
398854
Bacillota
CTC
Glu
>WENV183569323
OOCB01028449
398854
Bacillota
CTC
Glu
>WENV183567217
OOCB01000282
291576
Bacillota
CCC
Gly
>WENV183567490
OOCB01000545
291576
Bacillota
CCC
Gly
>WENV183567747
OOCB01000940
291576
Bacillota
CCC
Gly
>WENV183568783
OOCB01006872
291576
Bacillota
CCC
Gly
>WENV183567493
OOCB01000550
480324
Bacillota
TTG
Gln
>WENV183567878
OOCB01001308
480324
Bacillota
TTG
Gln
>WENV183568224
OOCB01002385
480324
Bacillota
TTG
Gln
>WENV183568332
OOCB01002898
480324
Bacillota
TTG
Gln
>WENV183569152
OOCB01017392
480324
Bacillota
TTG
Gln
>WENV183569432
OOCB01045759
480324
Bacillota
TTG
Gln
>WENV183567603
OOCB01000710
497729
Bacillota
CCA
Trp
>WENV183567848
OOCB01001208
497729
Bacillota
CCA
Trp
>WENV183567995
OOCB01001618
497729
Bacillota
CCA
Trp
>WENV183568859
OOCB01008088
497729
Bacillota
CCA
Trp
>WENV183569362
OOCB01033131
497729
Bacillota
CCA
Trp
>WENV183568545
OOCB01004127
180688
Bacillota
GTC
Asp
>WENV183568736
OOCB01006175
175899
Bacillota
GTC
Asp
>WENV183568436
OOCB01003348
303718
Bacillota
TGT
Thr
>WENV183567724
OOCB01000902
303718
Bacillota
TGT
Thr
>WENV183569120
OOCB01015966
303718
Bacillota
TGT
Thr
>WENV183567752
OOCB01000950
56079
Bacillota
AAG
Leu
>WENV183567753
OOCB01000950
56079
Bacillota
AAG
Leu
>WENV183567745
OOCB01000931
323864
Bacillota
TGC
Ala
>WENV183569062
OOCB01013615
323864
Bacillota
TGC
Ala
>WENV183569065
OOCB01013701
323864
Bacillota
TGC
Ala
>WENV183568651
OOCB01005069
175911
Bacillota
GTC
Asp
>WENV183569531
OOCB01070420
176019
Bacillota
GTG
His
>WENV183569239
OOCB01021755
186051
Bacillota
GAT
Ile
>WENV183567168
OOCB01000221
398857
Bacillota
TTC
Glu
>WENV183567454
OOCB01000511
398857
Bacillota
TTC
Glu
>WENV183567549
OOCB01000619
398857
Bacillota
TTC
Glu
>WENV183567521
OOCB01000581
117745
Bacillota
GTA
Tyr
>WENV183566894
OOCB01000050
280444
Bacillota
GGT
Thr
>WENV183566895
OOCB01000050
280444
Bacillota
GGT
Thr
>WENV183566897
OOCB01000050
280444
Bacillota
GGT
Thr
>WENV183568016
OOCB01001678
280444
Bacillota
GGT
Thr
>WENV183568199
OOCB01002298
280444
Bacillota
GGT
Thr
>WENV183568354
OOCB01003053
280444
Bacillota
GGT
Thr
>WENV183568749
OOCB01006365
280444
Bacillota
GGT
Thr
>WENV183569095
OOCB01014975
280444
Bacillota
GGT
Thr
>WENV183569275
OOCB01024372
280444
Bacillota
GGT
Thr
>WENV183569631
OOCB01102823
119459
Bacillota
TAG
Leu
>WENV183569004
OOCB01011600
483485
Bacillota
CCC
Gly
>WENV183569099
OOCB01015311
291597
Bacillota
TGC
Ala
>WENV183567121
OOCB01000185
46643
Bacillota
TGA
Ser
>WENV183567906
OOCB01001387
321753
Bacillota
GCC
Gly
>WENV183567259
OOCB01000318
179755
Bacillota
CCG
Arg
>WENV183567404
OOCB01000463
179755
Bacillota
CCG
Arg
>WENV183567791
OOCB01001053
179755
Bacillota
CCG
Arg
>WENV183567820
OOCB01001146
179755
Bacillota
CCG
Arg
>WENV183568513
OOCB01003876
179755
Bacillota
CCG
Arg
>WENV183569366
OOCB01033548
179755
Bacillota
CCG
Arg
>WENV183567833
OOCB01001169
46835
Bacillota
TAA
Leu
>WENV183567888
OOCB01001323
46835
Bacillota
TAA
Leu
>WENV183568875
OOCB01008571
330413
Bacillota
CTT
Lys
>WENV183567258
OOCB01000318
398832
Bacillota
TTC
Glu
>WENV183567406
OOCB01000463
398832
Bacillota
TTC
Glu
>WENV183568287
OOCB01002689
398832
Bacillota
TTC
Glu
>WENV183568458
OOCB01003531
398832
Bacillota
TTC
Glu
>WENV183568671
OOCB01005337
398832
Bacillota
TTC
Glu
>WENV183567567
OOCB01000648
118669
Bacillota
GTA
Tyr
>WENV183568816
OOCB01007365
118669
Bacillota
GTA
Tyr
>WENV183569182
OOCB01018838
118669
Bacillota
GTA
Tyr
>WENV183567850
OOCB01001215
52748
Bacillota
TGA
Ser
>WENV183569137
OOCB01016767
280476
Bacillota
TTT
Lys
>WENV183569524
OOCB01068628
280476
Bacillota
TTT
Lys
>WENV183567118
OOCB01000185
280462
Bacillota
GAA
Phe
>WENV183566782
OOCB01000009
398852
Bacillota
CTC
Glu
>WENV183566783
OOCB01000009
398852
Bacillota
CTC
Glu
>WENV183566784
OOCB01000009
398852
Bacillota
CTC
Glu
>WENV183567443
OOCB01000501
398852
Bacillota
CTC
Glu
>WENV183568202
OOCB01002310
398852
Bacillota
CTC
Glu
>WENV183568280
OOCB01002656
398852
Bacillota
CTC
Glu
>WENV183569372
OOCB01034762
201856
Bacillota
GAT
Ile
>WENV183567424
OOCB01000485
289123
Bacillota
GGT
Thr
>WENV183568529
OOCB01004024
280483
Bacillota
GAA
Phe
>WENV183568549
OOCB01004166
280483
Bacillota
GAA
Phe
>WENV183568327
OOCB01002893
298260
Bacillota
GTT
Asn
>WENV183569488
OOCB01057762
406186
Bacillota
CTC
Glu
>WENV183568527
OOCB01004012
285601
Bacillota
TTC
Glu
>WENV183568595
OOCB01004578
285601
Bacillota
TTC
Glu
>WENV183567660
OOCB01000782
175857
Bacillota
GTG
His
>WENV183568123
OOCB01001997
175857
Bacillota
GTG
His
>WENV183568961
OOCB01010361
175857
Bacillota
GTG
His
>WENV183569105
OOCB01015675
175857
Bacillota
GTG
His
>WENV183569256
OOCB01022939
175857
Bacillota
GTG
His
>WENV183566743
OOCB01000001
285756
Bacillota
GCC
Gly
>WENV183567350
OOCB01000399
398833
Bacillota
TGT
Thr
>WENV183567538
OOCB01000600
398833
Bacillota
TGT
Thr
>WENV183568306
OOCB01002800
398833
Bacillota
TGT
Thr
>WENV183568310
OOCB01002823
398833
Bacillota
TGT
Thr
>WENV183568936
OOCB01009803
398833
Bacillota
TGT
Thr
>WENV183566896
OOCB01000050
175849
Bacillota
GTC
Asp
>WENV183568774
OOCB01006684
175849
Bacillota
GTC
Asp
>WENV183569094
OOCB01014975
175849
Bacillota
GTC
Asp
>WENV183569590
OOCB01088929
280486
Bacillota
TGC
Ala
>WENV183566919
OOCB01000062
405393
Bacillota
GCC
Gly
>WENV183567099
OOCB01000170
405393
Bacillota
GCC
Gly
>WENV183567486
OOCB01000543
405393
Bacillota
GCC
Gly
>WENV183566898
OOCB01000050
56074
Bacillota
TGA
Ser
>WENV183567767
OOCB01000998
56074
Bacillota
TGA
Ser
>WENV183568419
OOCB01003302
56074
Bacillota
TGA
Ser
>WENV183568823
OOCB01007499
56074
Bacillota
TGA
Ser
>WENV183567647
OOCB01000757
280473
Bacillota
TGG
Pro
>WENV183568069
OOCB01001872
280473
Bacillota
TGG
Pro
>WENV183568093
OOCB01001931
280473
Bacillota
TGG
Pro
>WENV183568777
OOCB01006734
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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