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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
66 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183572498
OOCF01013360
280500
Bacillota
TGC
Ala
>WENV183572276
OOCF01002877
349107
Bacillota
GCC
Gly
>WENV183572370
OOCF01006104
349107
Bacillota
GCC
Gly
>WENV183572371
OOCF01006104
405363
Bacillota
GCA
Cys
>WENV183572070
OOCF01000615
280428
Bacillota
GAA
Phe
>WENV183572279
OOCF01002877
280428
Bacillota
GAA
Phe
>WENV183572310
OOCF01003571
280428
Bacillota
GAA
Phe
>WENV183572030
OOCF01000440
229015
Bacillota
GTG
His
>WENV183572277
OOCF01002877
280466
Bacillota
TAC
Val
>WENV183572148
OOCF01001215
284746
Bacillota
CTG
Gln
>WENV183572254
OOCF01002547
175842
Bacillota
CAC
Val
>WENV183572485
OOCF01012172
236579
Bacillota
GAT
Ile
>WENV183572484
OOCF01012172
295166
Bacillota
TGC
Ala
>WENV183572255
OOCF01002552
190476
Bacillota
CAT
Met
>WENV183572251
OOCF01002490
280447
Bacillota
GAC
Val
>WENV183572540
OOCF01020107
5692
Bacillota
GCT
Ser
>WENV183572290
OOCF01003076
359682
Bacillota
TAC
Val
>WENV183572549
OOCF01021742
175825
Bacillota
GAT
Ile
>WENV183572016
OOCF01000397
73009
Bacillota
CAG
Leu
>WENV183572542
OOCF01020363
73009
Bacillota
CAG
Leu
>WENV183572013
OOCF01000388
291581
Bacillota
CGG
Pro
>WENV183572548
OOCF01021742
280436
Bacillota
TGC
Ala
>WENV183572028
OOCF01000438
290325
Bacillota
GCC
Gly
>WENV183572071
OOCF01000615
290325
Bacillota
GCC
Gly
>WENV183572424
OOCF01008088
175831
Bacillota
ACG
Arg
>WENV183572601
OOCF01035134
175831
Bacillota
ACG
Arg
>WENV183572336
OOCF01004660
179810
Bacillota
TCT
Arg
>WENV183572558
OOCF01024507
484885
Bacillota
TCC
Gly
>WENV183572012
OOCF01000388
480322
Bacillota
CTG
Gln
>WENV183572145
OOCF01001181
175868
Bacillota
GTT
Asn
>WENV183572488
OOCF01012319
175868
Bacillota
GTT
Asn
>WENV183572515
OOCF01015277
175868
Bacillota
GTT
Asn
>WENV183572285
OOCF01003076
284744
Bacillota
TTT
Lys
>WENV183572479
OOCF01011669
398854
Bacillota
CTC
Glu
>WENV183572487
OOCF01012319
398854
Bacillota
CTC
Glu
>WENV183572514
OOCF01015277
398854
Bacillota
CTC
Glu
>WENV183572460
OOCF01010115
291576
Bacillota
CCC
Gly
>WENV183572151
OOCF01001237
480324
Bacillota
TTG
Gln
>WENV183572380
OOCF01006366
480324
Bacillota
TTG
Gln
>WENV183572560
OOCF01024965
497729
Bacillota
CCA
Trp
>WENV183571849
OOCF01000024
303718
Bacillota
TGT
Thr
>WENV183572288
OOCF01003076
179935
Bacillota
GTC
Asp
>WENV183572235
OOCF01002197
280444
Bacillota
GGT
Thr
>WENV183572402
OOCF01007005
280444
Bacillota
GGT
Thr
>WENV183572444
OOCF01008769
280444
Bacillota
GGT
Thr
>WENV183572617
OOCF01040702
280444
Bacillota
GGT
Thr
>WENV183571791
OOCF01000003
317482
Bacillota
TAC
Val
>WENV183572611
OOCF01039411
291597
Bacillota
TGC
Ala
>WENV183572406
OOCF01007119
179755
Bacillota
CCG
Arg
>WENV183572534
OOCF01018923
179755
Bacillota
CCG
Arg
>WENV183572286
OOCF01003076
401111
Bacillota
TTC
Glu
>WENV183572505
OOCF01014192
46835
Bacillota
TAA
Leu
>WENV183572289
OOCF01003076
284742
Bacillota
GAA
Phe
>WENV183572256
OOCF01002552
398832
Bacillota
TTC
Glu
>WENV183571953
OOCF01000195
280483
Bacillota
GAA
Phe
>WENV183571846
OOCF01000022
285756
Bacillota
GCC
Gly
>WENV183571954
OOCF01000195
285756
Bacillota
GCC
Gly
>WENV183572194
OOCF01001528
285756
Bacillota
GCC
Gly
>WENV183572220
OOCF01001841
398833
Bacillota
TGT
Thr
>WENV183572278
OOCF01002877
175849
Bacillota
GTC
Asp
>WENV183572369
OOCF01006104
175849
Bacillota
GTC
Asp
>WENV183572401
OOCF01007005
175849
Bacillota
GTC
Asp
>WENV183572443
OOCF01008769
175849
Bacillota
GTC
Asp
>WENV183572616
OOCF01040702
175849
Bacillota
GTC
Asp
>WENV183572539
OOCF01020107
56074
Bacillota
TGA
Ser
>WENV183572172
OOCF01001397
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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