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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
82 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183576010
OOCI01019472
99852
Bacillota
GTA
Tyr
>WENV183575417
OOCI01001802
343590
Bacillota
GCC
Gly
>WENV183575616
OOCI01004032
343590
Bacillota
GCC
Gly
>WENV183576227
OOCI01050238
280500
Bacillota
TGC
Ala
>WENV183575820
OOCI01008970
349107
Bacillota
GCC
Gly
>WENV183575675
OOCI01005119
405363
Bacillota
GCA
Cys
>WENV183574807
OOCI01000026
290391
Bacillota
TAC
Val
>WENV183575819
OOCI01008970
280428
Bacillota
GAA
Phe
>WENV183576113
OOCI01030749
229015
Bacillota
GTG
His
>WENV183574961
OOCI01000150
302145
Bacillota
GAA
Phe
>WENV183575508
OOCI01002670
284746
Bacillota
CTG
Gln
>WENV183575198
OOCI01000648
280492
Bacillota
CTT
Lys
>WENV183575012
OOCI01000209
280492
Bacillota
CTT
Lys
>WENV183575229
OOCI01000738
175842
Bacillota
CAC
Val
>WENV183575569
OOCI01003379
175842
Bacillota
CAC
Val
>WENV183576228
OOCI01050381
179563
Bacillota
GAT
Ile
>WENV183575485
OOCI01002457
190476
Bacillota
CAT
Met
>WENV183574861
OOCI01000054
73664
Bacillota
CAG
Leu
>WENV183575054
OOCI01000267
73664
Bacillota
CAG
Leu
>WENV183575470
OOCI01002272
280447
Bacillota
GAC
Val
>WENV183575687
OOCI01005345
280447
Bacillota
GAC
Val
>WENV183575590
OOCI01003598
5692
Bacillota
GCT
Ser
>WENV183575745
OOCI01006852
5692
Bacillota
GCT
Ser
>WENV183575728
OOCI01006325
73009
Bacillota
CAG
Leu
>WENV183576191
OOCI01042258
481217
Bacillota
GCA
Cys
>WENV183576111
OOCI01030529
189473
Bacillota
GAT
Ile
>WENV183575660
OOCI01004788
291581
Bacillota
CGG
Pro
>WENV183575493
OOCI01002576
175859
Bacillota
TCT
Arg
>WENV183575518
OOCI01002746
175859
Bacillota
TCT
Arg
>WENV183575922
OOCI01012834
280436
Bacillota
TGC
Ala
>WENV183575617
OOCI01004040
175831
Bacillota
ACG
Arg
>WENV183575659
OOCI01004788
480322
Bacillota
CTG
Gln
>WENV183575729
OOCI01006331
480322
Bacillota
CTG
Gln
>WENV183575935
OOCI01013446
175868
Bacillota
GTT
Asn
>WENV183575142
OOCI01000493
284744
Bacillota
TTT
Lys
>WENV183575910
OOCI01012090
322848
Bacillota
CTT
Lys
>WENV183575909
OOCI01012090
398854
Bacillota
CTC
Glu
>WENV183575471
OOCI01002278
291576
Bacillota
CCC
Gly
>WENV183575534
OOCI01002943
480324
Bacillota
TTG
Gln
>WENV183575306
OOCI01001064
497729
Bacillota
CCA
Trp
>WENV183574889
OOCI01000093
303718
Bacillota
TGT
Thr
>WENV183575309
OOCI01001077
303718
Bacillota
TGT
Thr
>WENV183575440
OOCI01001988
303718
Bacillota
TGT
Thr
>WENV183575721
OOCI01006162
303718
Bacillota
TGT
Thr
>WENV183574859
OOCI01000054
56079
Bacillota
AAG
Leu
>WENV183574860
OOCI01000054
56079
Bacillota
AAG
Leu
>WENV183576008
OOCI01019308
292374
Bacillota
TGC
Ala
>WENV183575145
OOCI01000493
179935
Bacillota
GTC
Asp
>WENV183576094
OOCI01027921
186051
Bacillota
GAT
Ile
>WENV183576162
OOCI01036869
204381
Bacillota
GAT
Ile
>WENV183575045
OOCI01000250
117745
Bacillota
GTA
Tyr
>WENV183575553
OOCI01003180
280444
Bacillota
GGT
Thr
>WENV183575782
OOCI01008027
280444
Bacillota
GGT
Thr
>WENV183575618
OOCI01004083
317482
Bacillota
TAC
Val
>WENV183575119
OOCI01000413
483485
Bacillota
CCC
Gly
>WENV183575264
OOCI01000870
342104
Bacillota
TAC
Val
>WENV183576295
OOCI01070852
223045
Bacillota
GAT
Ile
>WENV183575527
OOCI01002879
179755
Bacillota
CCG
Arg
>WENV183575701
OOCI01005656
179755
Bacillota
CCG
Arg
>WENV183575143
OOCI01000493
401111
Bacillota
TTC
Glu
>WENV183574980
OOCI01000176
58120
Bacillota
AAG
Leu
>WENV183575146
OOCI01000493
284742
Bacillota
GAA
Phe
>WENV183575486
OOCI01002457
398832
Bacillota
TTC
Glu
>WENV183576118
OOCI01031074
398832
Bacillota
TTC
Glu
>WENV183574974
OOCI01000167
118669
Bacillota
GTA
Tyr
>WENV183574805
OOCI01000025
52748
Bacillota
TGA
Ser
>WENV183576125
OOCI01032338
332651
Bacillota
GTT
Asn
>WENV183575111
OOCI01000396
280462
Bacillota
GAA
Phe
>WENV183575089
OOCI01000349
398852
Bacillota
CTC
Glu
>WENV183575094
OOCI01000359
398852
Bacillota
CTC
Glu
>WENV183575378
OOCI01001462
398852
Bacillota
CTC
Glu
>WENV183576009
OOCI01019346
398852
Bacillota
CTC
Glu
>WENV183576007
OOCI01019308
201856
Bacillota
GAT
Ile
>WENV183576280
OOCI01064466
289123
Bacillota
GGT
Thr
>WENV183574820
OOCI01000032
280483
Bacillota
GAA
Phe
>WENV183574821
OOCI01000032
285756
Bacillota
GCC
Gly
>WENV183575558
OOCI01003236
398833
Bacillota
TGT
Thr
>WENV183575781
OOCI01008027
175849
Bacillota
GTC
Asp
>WENV183575112
OOCI01000396
280463
Bacillota
TTT
Lys
>WENV183575589
OOCI01003598
56074
Bacillota
TGA
Ser
>WENV183575744
OOCI01006852
56074
Bacillota
TGA
Ser
>WENV183575920
OOCI01012754
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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