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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
59 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183577705
OOCK01001686
510477
Bacillota
TCC
Gly
>WENV183577973
OOCK01019521
99852
Bacillota
GTA
Tyr
>WENV183577916
OOCK01011877
280500
Bacillota
TGC
Ala
>WENV183577986
OOCK01021269
280500
Bacillota
TGC
Ala
>WENV183577768
OOCK01002393
280428
Bacillota
GAA
Phe
>WENV183577334
OOCK01000022
229015
Bacillota
GTG
His
>WENV183577629
OOCK01000923
284746
Bacillota
CTG
Gln
>WENV183577750
OOCK01002152
175842
Bacillota
CAC
Val
>WENV183577524
OOCK01000370
291629
Bacillota
CCA
Trp
>WENV183577737
OOCK01002051
190476
Bacillota
CAT
Met
>WENV183577555
OOCK01000499
280447
Bacillota
GAC
Val
>WENV183577882
OOCK01008163
280447
Bacillota
GAC
Val
>WENV183577892
OOCK01009462
280447
Bacillota
GAC
Val
>WENV183577771
OOCK01002405
5692
Bacillota
GCT
Ser
>WENV183577641
OOCK01001001
312274
Bacillota
GGC
Ala
>WENV183577522
OOCK01000370
186123
Bacillota
GTC
Asp
>WENV183577556
OOCK01000517
186123
Bacillota
GTC
Asp
>WENV183577682
OOCK01001403
186123
Bacillota
GTC
Asp
>WENV183577692
OOCK01001431
359682
Bacillota
TAC
Val
>WENV183577876
OOCK01007350
175825
Bacillota
GAT
Ile
>WENV183577573
OOCK01000571
284723
Bacillota
TAC
Val
>WENV183577625
OOCK01000909
73009
Bacillota
CAG
Leu
>WENV183577707
OOCK01001698
73009
Bacillota
CAG
Leu
>WENV183577792
OOCK01002915
73009
Bacillota
CAG
Leu
>WENV183577661
OOCK01001255
175859
Bacillota
TCT
Arg
>WENV183577607
OOCK01000815
175859
Bacillota
TCT
Arg
>WENV183577875
OOCK01007350
280436
Bacillota
TGC
Ala
>WENV183577938
OOCK01014179
175847
Bacillota
GTC
Asp
>WENV183577881
OOCK01007956
175831
Bacillota
ACG
Arg
>WENV183577424
OOCK01000161
332181
Bacillota
TGT
Thr
>WENV183577333
OOCK01000022
179810
Bacillota
TCT
Arg
>WENV183577811
OOCK01003520
284627
Bacillota
GAA
Phe
>WENV183577557
OOCK01000517
291634
Bacillota
GAA
Phe
>WENV183577683
OOCK01001403
291634
Bacillota
GAA
Phe
>WENV183577441
OOCK01000198
346451
Bacillota
TTT
Lys
>WENV183577687
OOCK01001431
284744
Bacillota
TTT
Lys
>WENV183577924
OOCK01012515
398854
Bacillota
CTC
Glu
>WENV183577655
OOCK01001167
291576
Bacillota
CCC
Gly
>WENV183577822
OOCK01003959
480324
Bacillota
TTG
Gln
>WENV183577992
OOCK01022049
497729
Bacillota
CCA
Trp
>WENV183577690
OOCK01001431
179935
Bacillota
GTC
Asp
>WENV183578031
OOCK01035277
186051
Bacillota
GAT
Ile
>WENV183577779
OOCK01002557
280444
Bacillota
GGT
Thr
>WENV183577867
OOCK01006989
280444
Bacillota
GGT
Thr
>WENV183577931
OOCK01013489
280444
Bacillota
GGT
Thr
>WENV183577729
OOCK01001957
179755
Bacillota
CCG
Arg
>WENV183577911
OOCK01011072
179755
Bacillota
CCG
Arg
>WENV183577688
OOCK01001431
401111
Bacillota
TTC
Glu
>WENV183578003
OOCK01023943
401111
Bacillota
TTC
Glu
>WENV183577691
OOCK01001431
284742
Bacillota
GAA
Phe
>WENV183577738
OOCK01002051
398832
Bacillota
TTC
Glu
>WENV183577941
OOCK01014179
118669
Bacillota
GTA
Tyr
>WENV183577936
OOCK01014149
398852
Bacillota
CTC
Glu
>WENV183577427
OOCK01000161
289123
Bacillota
GGT
Thr
>WENV183577928
OOCK01012751
398833
Bacillota
TGT
Thr
>WENV183577523
OOCK01000370
405393
Bacillota
GCC
Gly
>WENV183577558
OOCK01000517
405393
Bacillota
GCC
Gly
>WENV183577770
OOCK01002405
56074
Bacillota
TGA
Ser
>WENV183578013
OOCK01027543
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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