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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
69 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183585226
OOCR01003414
99852
Bacillota
GTA
Tyr
>WENV183585421
OOCR01027601
280500
Bacillota
TGC
Ala
>WENV183585111
OOCR01001168
405363
Bacillota
GCA
Cys
>WENV183585200
OOCR01002576
280428
Bacillota
GAA
Phe
>WENV183585141
OOCR01001595
284746
Bacillota
CTG
Gln
>WENV183585181
OOCR01002311
175842
Bacillota
CAC
Val
>WENV183585233
OOCR01003531
175842
Bacillota
CAC
Val
>WENV183585088
OOCR01000968
291629
Bacillota
CCA
Trp
>WENV183585422
OOCR01027962
29930
Bacillota
GGA
Ser
>WENV183585373
OOCR01019015
184497
Bacillota
GGG
Pro
>WENV183585273
OOCR01006034
179176
Bacillota
ACG
Arg
>WENV183585356
OOCR01016223
295166
Bacillota
TGC
Ala
>WENV183584950
OOCR01000384
190476
Bacillota
CAT
Met
>WENV183585155
OOCR01001742
82124
Bacillota
TAA
Leu
>WENV183585001
OOCR01000497
280447
Bacillota
GAC
Val
>WENV183585030
OOCR01000665
280447
Bacillota
GAC
Val
>WENV183584954
OOCR01000390
5692
Bacillota
GCT
Ser
>WENV183584998
OOCR01000489
5692
Bacillota
GCT
Ser
>WENV183585015
OOCR01000563
5692
Bacillota
GCT
Ser
>WENV183585219
OOCR01003096
312274
Bacillota
GGC
Ala
>WENV183584975
OOCR01000424
186123
Bacillota
GTC
Asp
>WENV183585033
OOCR01000670
73009
Bacillota
CAG
Leu
>WENV183585153
OOCR01001726
291581
Bacillota
CGG
Pro
>WENV183585291
OOCR01007456
291581
Bacillota
CGG
Pro
>WENV183585098
OOCR01001026
175859
Bacillota
TCT
Arg
>WENV183584992
OOCR01000473
175831
Bacillota
ACG
Arg
>WENV183585417
OOCR01027497
332181
Bacillota
TGT
Thr
>WENV183584812
OOCR01000116
179810
Bacillota
TCT
Arg
>WENV183585047
OOCR01000739
284627
Bacillota
GAA
Phe
>WENV183584976
OOCR01000424
291634
Bacillota
GAA
Phe
>WENV183584830
OOCR01000135
294020
Bacillota
TAC
Val
>WENV183585414
OOCR01026257
295350
Bacillota
TGC
Ala
>WENV183585009
OOCR01000526
293309
Bacillota
GTT
Asn
>WENV183584968
OOCR01000403
482449
Bacillota
TCC
Gly
>WENV183585420
OOCR01027601
175916
Bacillota
GAT
Ile
>WENV183585124
OOCR01001240
480322
Bacillota
CTG
Gln
>WENV183585152
OOCR01001726
480322
Bacillota
CTG
Gln
>WENV183585174
OOCR01002162
480322
Bacillota
CTG
Gln
>WENV183585290
OOCR01007456
480322
Bacillota
CTG
Gln
>WENV183585183
OOCR01002360
187364
Bacillota
CAT
Met
>WENV183585032
OOCR01000668
175868
Bacillota
GTT
Asn
>WENV183585043
OOCR01000733
284744
Bacillota
TTT
Lys
>WENV183585345
OOCR01014005
322848
Bacillota
CTT
Lys
>WENV183585344
OOCR01014005
398854
Bacillota
CTC
Glu
>WENV183584914
OOCR01000305
291576
Bacillota
CCC
Gly
>WENV183585244
OOCR01004409
291576
Bacillota
CCC
Gly
>WENV183585053
OOCR01000778
480324
Bacillota
TTG
Gln
>WENV183584965
OOCR01000403
179935
Bacillota
GTC
Asp
>WENV183585301
OOCR01008243
398857
Bacillota
TTC
Glu
>WENV183585122
OOCR01001230
280444
Bacillota
GGT
Thr
>WENV183585131
OOCR01001375
483485
Bacillota
CCC
Gly
>WENV183585201
OOCR01002576
321753
Bacillota
GCC
Gly
>WENV183584949
OOCR01000384
179755
Bacillota
CCG
Arg
>WENV183585187
OOCR01002365
127792
Bacillota
TAG
Leu
>WENV183585044
OOCR01000733
401111
Bacillota
TTC
Glu
>WENV183585280
OOCR01006416
58120
Bacillota
AAG
Leu
>WENV183584960
OOCR01000403
284742
Bacillota
GAA
Phe
>WENV183584966
OOCR01000403
284742
Bacillota
GAA
Phe
>WENV183584951
OOCR01000384
398832
Bacillota
TTC
Glu
>WENV183585154
OOCR01001731
118669
Bacillota
GTA
Tyr
>WENV183585298
OOCR01008040
309916
Bacillota
TTT
Lys
>WENV183585443
OOCR01033996
201856
Bacillota
GAT
Ile
>WENV183585370
OOCR01018416
280486
Bacillota
TGC
Ala
>WENV183585062
OOCR01000801
405393
Bacillota
GCC
Gly
>WENV183584953
OOCR01000390
56074
Bacillota
TGA
Ser
>WENV183584997
OOCR01000489
56074
Bacillota
TGA
Ser
>WENV183585014
OOCR01000563
56074
Bacillota
TGA
Ser
>WENV183585198
OOCR01002529
280473
Bacillota
TGG
Pro
>WENV183585266
OOCR01005856
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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