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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
133 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183585786
OOCS01000324
99852
Bacillota
GTA
Tyr
>WENV183586002
OOCS01001268
99852
Bacillota
GTA
Tyr
>WENV183585641
OOCS01000127
349107
Bacillota
GCC
Gly
>WENV183585765
OOCS01000288
349107
Bacillota
GCC
Gly
>WENV183585879
OOCS01000614
349107
Bacillota
GCC
Gly
>WENV183585881
OOCS01000614
349107
Bacillota
GCC
Gly
>WENV183585994
OOCS01001218
349107
Bacillota
GCC
Gly
>WENV183586008
OOCS01001330
349107
Bacillota
GCC
Gly
>WENV183586012
OOCS01001330
349107
Bacillota
GCC
Gly
>WENV183585882
OOCS01000614
405363
Bacillota
GCA
Cys
>WENV183586001
OOCS01001268
405363
Bacillota
GCA
Cys
>WENV183585559
OOCS01000045
290391
Bacillota
TAC
Val
>WENV183585661
OOCS01000138
290391
Bacillota
TAC
Val
>WENV183585762
OOCS01000285
290391
Bacillota
TAC
Val
>WENV183585640
OOCS01000127
280428
Bacillota
GAA
Phe
>WENV183585768
OOCS01000288
280428
Bacillota
GAA
Phe
>WENV183585967
OOCS01001065
280428
Bacillota
GAA
Phe
>WENV183585988
OOCS01001176
280428
Bacillota
GAA
Phe
>WENV183586011
OOCS01001330
280428
Bacillota
GAA
Phe
>WENV183586315
OOCS01023413
179917
Bacillota
CAT
Met
>WENV183585972
OOCS01001100
302145
Bacillota
GAA
Phe
>WENV183585766
OOCS01000288
280466
Bacillota
TAC
Val
>WENV183586009
OOCS01001330
280466
Bacillota
TAC
Val
>WENV183585876
OOCS01000608
280492
Bacillota
CTT
Lys
>WENV183585679
OOCS01000157
175842
Bacillota
CAC
Val
>WENV183585947
OOCS01000929
175842
Bacillota
CAC
Val
>WENV183585805
OOCS01000353
228119
Bacillota
TCT
Arg
>WENV183585858
OOCS01000513
228119
Bacillota
TCT
Arg
>WENV183586224
OOCS01007838
184497
Bacillota
GGG
Pro
>WENV183586031
OOCS01001540
179176
Bacillota
ACG
Arg
>WENV183586189
OOCS01005462
352588
Bacillota
CAT
Met
>WENV183586283
OOCS01018599
291553
Bacillota
GAA
Phe
>WENV183585777
OOCS01000304
190476
Bacillota
CAT
Met
>WENV183585863
OOCS01000527
190476
Bacillota
CAT
Met
>WENV183585989
OOCS01001182
190476
Bacillota
CAT
Met
>WENV183585707
OOCS01000211
73664
Bacillota
CAG
Leu
>WENV183585928
OOCS01000851
73664
Bacillota
CAG
Leu
>WENV183585754
OOCS01000268
280447
Bacillota
GAC
Val
>WENV183586108
OOCS01002992
280447
Bacillota
GAC
Val
>WENV183586178
OOCS01005241
280447
Bacillota
GAC
Val
>WENV183586237
OOCS01009278
280447
Bacillota
GAC
Val
>WENV183585637
OOCS01000126
5692
Bacillota
GCT
Ser
>WENV183586082
OOCS01002247
5692
Bacillota
GCT
Ser
>WENV183586070
OOCS01002096
284723
Bacillota
TAC
Val
>WENV183586107
OOCS01002936
284723
Bacillota
TAC
Val
>WENV183585680
OOCS01000157
73009
Bacillota
CAG
Leu
>WENV183585689
OOCS01000168
73009
Bacillota
CAG
Leu
>WENV183586061
OOCS01001958
73009
Bacillota
CAG
Leu
>WENV183586132
OOCS01003654
73009
Bacillota
CAG
Leu
>WENV183585781
OOCS01000306
291581
Bacillota
CGG
Pro
>WENV183585981
OOCS01001126
291581
Bacillota
CGG
Pro
>WENV183586281
OOCS01018157
291581
Bacillota
CGG
Pro
>WENV183585796
OOCS01000346
175859
Bacillota
TCT
Arg
>WENV183585830
OOCS01000387
175859
Bacillota
TCT
Arg
>WENV183586114
OOCS01003210
398835
Bacillota
GCC
Gly
>WENV183586336
OOCS01027208
332181
Bacillota
TGT
Thr
>WENV183586270
OOCS01014381
510876
Bacillota
GGT
Thr
>WENV183586312
OOCS01023413
294020
Bacillota
TAC
Val
>WENV183586186
OOCS01005402
137739
Bacillota
TAG
Leu
>WENV183586376
OOCS01036901
404091
Bacillota
TTG
Gln
>WENV183586248
OOCS01010459
27216
Bacillota
GCT
Ser
>WENV183586133
OOCS01003662
484885
Bacillota
TCC
Gly
>WENV183585629
OOCS01000115
480322
Bacillota
CTG
Gln
>WENV183585697
OOCS01000198
480322
Bacillota
CTG
Gln
>WENV183585780
OOCS01000306
480322
Bacillota
CTG
Gln
>WENV183585980
OOCS01001126
480322
Bacillota
CTG
Gln
>WENV183586214
OOCS01007142
480322
Bacillota
CTG
Gln
>WENV183586280
OOCS01018157
480322
Bacillota
CTG
Gln
>WENV183586169
OOCS01004997
401685
Bacillota
TTG
Gln
>WENV183585593
OOCS01000079
175868
Bacillota
GTT
Asn
>WENV183585597
OOCS01000080
175868
Bacillota
GTT
Asn
>WENV183585650
OOCS01000133
175868
Bacillota
GTT
Asn
>WENV183585808
OOCS01000357
175868
Bacillota
GTT
Asn
>WENV183586347
OOCS01029610
175868
Bacillota
GTT
Asn
>WENV183586375
OOCS01036901
289716
Bacillota
GTG
His
>WENV183585596
OOCS01000080
398854
Bacillota
CTC
Glu
>WENV183585649
OOCS01000133
398854
Bacillota
CTC
Glu
>WENV183585948
OOCS01000962
398854
Bacillota
CTC
Glu
>WENV183585870
OOCS01000575
291576
Bacillota
CCC
Gly
>WENV183585779
OOCS01000306
480324
Bacillota
TTG
Gln
>WENV183585883
OOCS01000614
480324
Bacillota
TTG
Gln
>WENV183586234
OOCS01009148
480324
Bacillota
TTG
Gln
>WENV183585920
OOCS01000795
497729
Bacillota
CCA
Trp
>WENV183585558
OOCS01000045
180688
Bacillota
GTC
Asp
>WENV183585761
OOCS01000285
180688
Bacillota
GTC
Asp
>WENV183586341
OOCS01028432
175899
Bacillota
GTC
Asp
>WENV183586360
OOCS01033378
175899
Bacillota
GTC
Asp
>WENV183585927
OOCS01000851
56079
Bacillota
AAG
Leu
>WENV183586065
OOCS01002059
56079
Bacillota
AAG
Leu
>WENV183585992
OOCS01001212
117745
Bacillota
GTA
Tyr
>WENV183585612
OOCS01000094
280444
Bacillota
GGT
Thr
>WENV183585614
OOCS01000094
280444
Bacillota
GGT
Thr
>WENV183585894
OOCS01000642
280444
Bacillota
GGT
Thr
>WENV183585895
OOCS01000642
280444
Bacillota
GGT
Thr
>WENV183586068
OOCS01002084
179755
Bacillota
CCG
Arg
>WENV183586080
OOCS01002243
179755
Bacillota
CCG
Arg
>WENV183586284
OOCS01018599
445407
Bacillota
GCC
Gly
>WENV183586377
OOCS01036901
289761
Bacillota
TTT
Lys
>WENV183585776
OOCS01000303
46835
Bacillota
TAA
Leu
>WENV183586074
OOCS01002154
46835
Bacillota
TAA
Leu
>WENV183585778
OOCS01000304
398832
Bacillota
TTC
Glu
>WENV183585864
OOCS01000527
398832
Bacillota
TTC
Glu
>WENV183585990
OOCS01001182
398832
Bacillota
TTC
Glu
>WENV183585519
OOCS01000015
118669
Bacillota
GTA
Tyr
>WENV183585692
OOCS01000186
118669
Bacillota
GTA
Tyr
>WENV183586301
OOCS01019696
283367
Bacillota
GCC
Gly
>WENV183585917
OOCS01000772
52748
Bacillota
TGA
Ser
>WENV183586291
OOCS01019095
52748
Bacillota
TGA
Ser
>WENV183585801
OOCS01000353
280476
Bacillota
TTT
Lys
>WENV183585860
OOCS01000513
280476
Bacillota
TTT
Lys
>WENV183586037
OOCS01001596
280462
Bacillota
GAA
Phe
>WENV183585482
OOCS01000005
398852
Bacillota
CTC
Glu
>WENV183585483
OOCS01000005
398852
Bacillota
CTC
Glu
>WENV183585484
OOCS01000005
398852
Bacillota
CTC
Glu
>WENV183585691
OOCS01000180
398852
Bacillota
CTC
Glu
>WENV183586201
OOCS01006288
298260
Bacillota
GTT
Asn
>WENV183586168
OOCS01004997
175857
Bacillota
GTG
His
>WENV183586050
OOCS01001752
398833
Bacillota
TGT
Thr
>WENV183586163
OOCS01004840
398833
Bacillota
TGT
Thr
>WENV183586370
OOCS01035879
398833
Bacillota
TGT
Thr
>WENV183585560
OOCS01000045
285556
Bacillota
TGT
Thr
>WENV183585759
OOCS01000285
285556
Bacillota
TGT
Thr
>WENV183585613
OOCS01000094
175849
Bacillota
GTC
Asp
>WENV183585880
OOCS01000614
175849
Bacillota
GTC
Asp
>WENV183585893
OOCS01000642
175849
Bacillota
GTC
Asp
>WENV183586010
OOCS01001330
175849
Bacillota
GTC
Asp
>WENV183586030
OOCS01001528
280463
Bacillota
TTT
Lys
>WENV183586165
OOCS01004854
280463
Bacillota
TTT
Lys
>WENV183586268
OOCS01014162
280486
Bacillota
TGC
Ala
>WENV183585636
OOCS01000126
56074
Bacillota
TGA
Ser
>WENV183586081
OOCS01002247
56074
Bacillota
TGA
Ser
>WENV183585915
OOCS01000757
280473
Bacillota
TGG
Pro
>WENV183585919
OOCS01000789
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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