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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
143 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183588862
OOCV01016429
200563
Bacillota
TGG
Pro
>WENV183588655
OOCV01002950
99852
Bacillota
GTA
Tyr
>WENV183588825
OOCV01012119
343590
Bacillota
GCC
Gly
>WENV183588826
OOCV01012119
343590
Bacillota
GCC
Gly
>WENV183588990
OOCV01036536
280500
Bacillota
TGC
Ala
>WENV183588414
OOCV01000527
349107
Bacillota
GCC
Gly
>WENV183588598
OOCV01002265
349107
Bacillota
GCC
Gly
>WENV183588647
OOCV01002919
349107
Bacillota
GCC
Gly
>WENV183588649
OOCV01002919
349107
Bacillota
GCC
Gly
>WENV183588653
OOCV01002950
349107
Bacillota
GCC
Gly
>WENV183588661
OOCV01003098
349107
Bacillota
GCC
Gly
>WENV183588671
OOCV01003217
349107
Bacillota
GCC
Gly
>WENV183588682
OOCV01003668
349107
Bacillota
GCC
Gly
>WENV183588716
OOCV01004539
349107
Bacillota
GCC
Gly
>WENV183588745
OOCV01005682
349107
Bacillota
GCC
Gly
>WENV183588807
OOCV01009369
349107
Bacillota
GCC
Gly
>WENV183588818
OOCV01010976
349107
Bacillota
GCC
Gly
>WENV183588924
OOCV01023914
349107
Bacillota
GCC
Gly
>WENV183588951
OOCV01027636
480520
Bacillota
TCC
Gly
>WENV183588650
OOCV01002919
405363
Bacillota
GCA
Cys
>WENV183588654
OOCV01002950
405363
Bacillota
GCA
Cys
>WENV183588925
OOCV01023914
405363
Bacillota
GCA
Cys
>WENV183588413
OOCV01000527
280428
Bacillota
GAA
Phe
>WENV183588646
OOCV01002919
280428
Bacillota
GAA
Phe
>WENV183588660
OOCV01003098
280428
Bacillota
GAA
Phe
>WENV183588806
OOCV01009369
280428
Bacillota
GAA
Phe
>WENV183588411
OOCV01000527
280466
Bacillota
TAC
Val
>WENV183588746
OOCV01005682
280466
Bacillota
TAC
Val
>WENV183588482
OOCV01000915
284746
Bacillota
CTG
Gln
>WENV183588498
OOCV01001055
175842
Bacillota
CAC
Val
>WENV183588541
OOCV01001445
175842
Bacillota
CAC
Val
>WENV183588612
OOCV01002397
175842
Bacillota
CAC
Val
>WENV183588588
OOCV01002190
291629
Bacillota
CCA
Trp
>WENV183588957
OOCV01028291
236579
Bacillota
GAT
Ile
>WENV183588813
OOCV01010191
184497
Bacillota
GGG
Pro
>WENV183588913
OOCV01021798
398915
Bacillota
TTC
Glu
>WENV183588953
OOCV01027636
376224
Bacillota
TGG
Pro
>WENV183588770
OOCV01006734
179176
Bacillota
ACG
Arg
>WENV183588956
OOCV01028291
295166
Bacillota
TGC
Ala
>WENV183588949
OOCV01027636
141334
Bacillota
TAG
Leu
>WENV183588872
OOCV01016429
176014
Bacillota
TCT
Arg
>WENV183588444
OOCV01000695
280447
Bacillota
GAC
Val
>WENV183588470
OOCV01000812
280447
Bacillota
GAC
Val
>WENV183588516
OOCV01001211
280447
Bacillota
GAC
Val
>WENV183588681
OOCV01003658
280447
Bacillota
GAC
Val
>WENV183588923
OOCV01023144
280447
Bacillota
GAC
Val
>WENV183588794
OOCV01008479
5692
Bacillota
GCT
Ser
>WENV183588585
OOCV01002190
186123
Bacillota
GTC
Asp
>WENV183588608
OOCV01002357
284723
Bacillota
TAC
Val
>WENV183588323
OOCV01000257
73009
Bacillota
CAG
Leu
>WENV183588436
OOCV01000620
73009
Bacillota
CAG
Leu
>WENV183588477
OOCV01000858
73009
Bacillota
CAG
Leu
>WENV183588293
OOCV01000205
291581
Bacillota
CGG
Pro
>WENV183588627
OOCV01002687
291581
Bacillota
CGG
Pro
>WENV183588778
OOCV01007236
291581
Bacillota
CGG
Pro
>WENV183588359
OOCV01000351
175859
Bacillota
TCT
Arg
>WENV183588464
OOCV01000804
175859
Bacillota
TCT
Arg
>WENV183588623
OOCV01002660
175859
Bacillota
TCT
Arg
>WENV183588946
OOCV01027636
330433
Bacillota
GTG
His
>WENV183588352
OOCV01000347
175847
Bacillota
GTC
Asp
>WENV183588934
OOCV01025372
175847
Bacillota
GTC
Asp
>WENV183588802
OOCV01009056
175831
Bacillota
ACG
Arg
>WENV183588968
OOCV01031232
175831
Bacillota
ACG
Arg
>WENV183588997
OOCV01037238
175831
Bacillota
ACG
Arg
>WENV183588763
OOCV01006615
332181
Bacillota
TGT
Thr
>WENV183588534
OOCV01001363
179810
Bacillota
TCT
Arg
>WENV183588357
OOCV01000347
284627
Bacillota
GAA
Phe
>WENV183588403
OOCV01000522
284627
Bacillota
GAA
Phe
>WENV183588586
OOCV01002190
291634
Bacillota
GAA
Phe
>WENV183588834
OOCV01012270
346451
Bacillota
TTT
Lys
>WENV183588901
OOCV01021141
295350
Bacillota
TGC
Ala
>WENV183588504
OOCV01001078
293309
Bacillota
GTT
Asn
>WENV183588428
OOCV01000585
27216
Bacillota
GCT
Ser
>WENV183588526
OOCV01001287
27216
Bacillota
GCT
Ser
>WENV183588292
OOCV01000205
480322
Bacillota
CTG
Gln
>WENV183588474
OOCV01000824
480322
Bacillota
CTG
Gln
>WENV183588548
OOCV01001546
480322
Bacillota
CTG
Gln
>WENV183588626
OOCV01002687
480322
Bacillota
CTG
Gln
>WENV183588689
OOCV01003810
480322
Bacillota
CTG
Gln
>WENV183588777
OOCV01007236
480322
Bacillota
CTG
Gln
>WENV183588897
OOCV01020653
480322
Bacillota
CTG
Gln
>WENV183588658
OOCV01003024
401685
Bacillota
TTG
Gln
>WENV183588298
OOCV01000216
175868
Bacillota
GTT
Asn
>WENV183588471
OOCV01000821
175868
Bacillota
GTT
Asn
>WENV183588629
OOCV01002692
175868
Bacillota
GTT
Asn
>WENV183588667
OOCV01003197
175868
Bacillota
GTT
Asn
>WENV183588757
OOCV01006150
175868
Bacillota
GTT
Asn
>WENV183588993
OOCV01036800
175868
Bacillota
GTT
Asn
>WENV183588506
OOCV01001082
284744
Bacillota
TTT
Lys
>WENV183588297
OOCV01000216
398854
Bacillota
CTC
Glu
>WENV183588628
OOCV01002692
398854
Bacillota
CTC
Glu
>WENV183588756
OOCV01006150
398854
Bacillota
CTC
Glu
>WENV183588761
OOCV01006533
398854
Bacillota
CTC
Glu
>WENV183588992
OOCV01036800
398854
Bacillota
CTC
Glu
>WENV183588423
OOCV01000546
291576
Bacillota
CCC
Gly
>WENV183588700
OOCV01004018
291576
Bacillota
CCC
Gly
>WENV183588844
OOCV01013369
291576
Bacillota
CCC
Gly
>WENV183588291
OOCV01000205
480324
Bacillota
TTG
Gln
>WENV183588463
OOCV01000803
480324
Bacillota
TTG
Gln
>WENV183588575
OOCV01001886
480324
Bacillota
TTG
Gln
>WENV183588331
OOCV01000283
497729
Bacillota
CCA
Trp
>WENV183588821
OOCV01011349
292374
Bacillota
TGC
Ala
>WENV183588726
OOCV01005050
179935
Bacillota
GTC
Asp
>WENV183588589
OOCV01002193
280444
Bacillota
GGT
Thr
>WENV183588599
OOCV01002270
280444
Bacillota
GGT
Thr
>WENV183588631
OOCV01002697
280444
Bacillota
GGT
Thr
>WENV183588696
OOCV01003994
280444
Bacillota
GGT
Thr
>WENV183588699
OOCV01003994
280444
Bacillota
GGT
Thr
>WENV183588815
OOCV01010242
280444
Bacillota
GGT
Thr
>WENV183588850
OOCV01013983
280444
Bacillota
GGT
Thr
>WENV183588948
OOCV01027636
354380
Bacillota
TTT
Lys
>WENV183588639
OOCV01002842
179755
Bacillota
CCG
Arg
>WENV183588738
OOCV01005141
179755
Bacillota
CCG
Arg
>WENV183588779
OOCV01007444
179755
Bacillota
CCG
Arg
>WENV183588853
OOCV01014279
179755
Bacillota
CCG
Arg
>WENV183588507
OOCV01001082
401111
Bacillota
TTC
Glu
>WENV183588733
OOCV01005050
401111
Bacillota
TTC
Glu
>WENV183588727
OOCV01005050
284742
Bacillota
GAA
Phe
>WENV183588559
OOCV01001679
398832
Bacillota
TTC
Glu
>WENV183588952
OOCV01027636
203851
Bacillota
TCT
Arg
>WENV183588355
OOCV01000347
118669
Bacillota
GTA
Tyr
>WENV183588401
OOCV01000522
118669
Bacillota
GTA
Tyr
>WENV183588820
OOCV01011349
201856
Bacillota
GAT
Ile
>WENV183588766
OOCV01006615
289123
Bacillota
GGT
Thr
>WENV183588468
OOCV01000811
280483
Bacillota
GAA
Phe
>WENV183588535
OOCV01001363
175857
Bacillota
GTG
His
>WENV183588657
OOCV01003024
175857
Bacillota
GTG
His
>WENV183588469
OOCV01000811
285756
Bacillota
GCC
Gly
>WENV183588339
OOCV01000302
398833
Bacillota
TGT
Thr
>WENV183588544
OOCV01001497
398833
Bacillota
TGT
Thr
>WENV183588958
OOCV01028396
398833
Bacillota
TGT
Thr
>WENV183588412
OOCV01000527
175849
Bacillota
GTC
Asp
>WENV183588630
OOCV01002697
175849
Bacillota
GTC
Asp
>WENV183588648
OOCV01002919
175849
Bacillota
GTC
Asp
>WENV183588662
OOCV01003098
175849
Bacillota
GTC
Asp
>WENV183588698
OOCV01003994
175849
Bacillota
GTC
Asp
>WENV183588747
OOCV01005682
175849
Bacillota
GTC
Asp
>WENV183588849
OOCV01013983
175849
Bacillota
GTC
Asp
>WENV183588587
OOCV01002190
405393
Bacillota
GCC
Gly
>WENV183588793
OOCV01008479
56074
Bacillota
TGA
Ser
>WENV183588305
OOCV01000227
280473
Bacillota
TGG
Pro
>WENV183588676
OOCV01003395
280473
Bacillota
TGG
Pro
>WENV183588959
OOCV01028515
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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