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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
109 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183590494
OOCX01000653
398916
Bacillota
>WENV183591097
OOCX01017533
443965
Bacillota
>WENV183590774
OOCX01002951
56079
Bacillota
AAG
Leu
>WENV183590412
OOCX01000388
175831
Bacillota
ACG
Arg
>WENV183590469
OOCX01000559
175842
Bacillota
CAC
Val
>WENV183590113
OOCX01000026
73664
Bacillota
CAG
Leu
>WENV183590678
OOCX01001701
73664
Bacillota
CAG
Leu
>WENV183590973
OOCX01008376
73664
Bacillota
CAG
Leu
>WENV183590456
OOCX01000525
73009
Bacillota
CAG
Leu
>WENV183590459
OOCX01000538
73009
Bacillota
CAG
Leu
>WENV183590726
OOCX01002186
190476
Bacillota
CAT
Met
>WENV183590505
OOCX01000697
291629
Bacillota
CCA
Trp
>WENV183590595
OOCX01001135
497729
Bacillota
CCA
Trp
>WENV183590452
OOCX01000507
291576
Bacillota
CCC
Gly
>WENV183590690
OOCX01001842
291576
Bacillota
CCC
Gly
>WENV183590723
OOCX01002115
483485
Bacillota
CCC
Gly
>WENV183590837
OOCX01003880
179755
Bacillota
CCG
Arg
>WENV183590957
OOCX01007189
179755
Bacillota
CCG
Arg
>WENV183590599
OOCX01001162
291581
Bacillota
CGG
Pro
>WENV183590717
OOCX01002072
291581
Bacillota
CGG
Pro
>WENV183590919
OOCX01005848
291581
Bacillota
CGG
Pro
>WENV183590909
OOCX01005529
398854
Bacillota
CTC
Glu
>WENV183591069
OOCX01014185
398854
Bacillota
CTC
Glu
>WENV183590293
OOCX01000171
398852
Bacillota
CTC
Glu
>WENV183590294
OOCX01000171
398852
Bacillota
CTC
Glu
>WENV183590295
OOCX01000171
398852
Bacillota
CTC
Glu
>WENV183590566
OOCX01000929
398852
Bacillota
CTC
Glu
>WENV183590686
OOCX01001787
398852
Bacillota
CTC
Glu
>WENV183590547
OOCX01000855
480322
Bacillota
CTG
Gln
>WENV183590598
OOCX01001162
480322
Bacillota
CTG
Gln
>WENV183590716
OOCX01002072
480322
Bacillota
CTG
Gln
>WENV183590752
OOCX01002688
480322
Bacillota
CTG
Gln
>WENV183590918
OOCX01005848
480322
Bacillota
CTG
Gln
>WENV183590962
OOCX01007390
480322
Bacillota
CTG
Gln
>WENV183590512
OOCX01000717
280492
Bacillota
CTT
Lys
>WENV183590696
OOCX01001957
280492
Bacillota
CTT
Lys
>WENV183590646
OOCX01001454
322848
Bacillota
CTT
Lys
>WENV183590968
OOCX01007921
284627
Bacillota
GAA
Phe
>WENV183590263
OOCX01000132
291634
Bacillota
GAA
Phe
>WENV183590612
OOCX01001220
280483
Bacillota
GAA
Phe
>WENV183590671
OOCX01001659
280447
Bacillota
GAC
Val
>WENV183590839
OOCX01003958
280447
Bacillota
GAC
Val
>WENV183590871
OOCX01004480
280447
Bacillota
GAC
Val
>WENV183590917
OOCX01005811
280447
Bacillota
GAC
Val
>WENV183591054
OOCX01013115
280447
Bacillota
GAC
Val
>WENV183590250
OOCX01000125
236579
Bacillota
GAT
Ile
>WENV183591181
OOCX01028029
175916
Bacillota
GAT
Ile
>WENV183591165
OOCX01024372
186051
Bacillota
GAT
Ile
>WENV183590450
OOCX01000497
405363
Bacillota
GCA
Cys
>WENV183590745
OOCX01002517
481217
Bacillota
GCA
Cys
>WENV183590817
OOCX01003553
343590
Bacillota
GCC
Gly
>WENV183590449
OOCX01000497
349107
Bacillota
GCC
Gly
>WENV183590785
OOCX01003106
398835
Bacillota
GCC
Gly
>WENV183590183
OOCX01000076
285756
Bacillota
GCC
Gly
>WENV183590613
OOCX01001220
285756
Bacillota
GCC
Gly
>WENV183590237
OOCX01000111
405393
Bacillota
GCC
Gly
>WENV183590385
OOCX01000319
5692
Bacillota
GCT
Ser
>WENV183590831
OOCX01003767
5692
Bacillota
GCT
Ser
>WENV183590893
OOCX01004881
5692
Bacillota
GCT
Ser
>WENV183591007
OOCX01010556
21311
Bacillota
GCT
Ser
>WENV183591078
OOCX01014746
25955
Bacillota
GCT
Ser
>WENV183590834
OOCX01003842
184497
Bacillota
GGG
Pro
>WENV183590864
OOCX01004246
280444
Bacillota
GGT
Thr
>WENV183590218
OOCX01000100
289123
Bacillota
GGT
Thr
>WENV183590457
OOCX01000525
99852
Bacillota
GTA
Tyr
>WENV183590996
OOCX01009603
117745
Bacillota
GTA
Tyr
>WENV183590434
OOCX01000451
118669
Bacillota
GTA
Tyr
>WENV183590262
OOCX01000132
186123
Bacillota
GTC
Asp
>WENV183591122
OOCX01019465
180688
Bacillota
GTC
Asp
>WENV183590554
OOCX01000887
175857
Bacillota
GTG
His
>WENV183590490
OOCX01000653
280641
Bacillota
GTT
Asn
>WENV183590644
OOCX01001420
175868
Bacillota
GTT
Asn
>WENV183590654
OOCX01001535
175868
Bacillota
GTT
Asn
>WENV183590803
OOCX01003335
175868
Bacillota
GTT
Asn
>WENV183590910
OOCX01005529
175868
Bacillota
GTT
Asn
>WENV183591070
OOCX01014185
175868
Bacillota
GTT
Asn
>WENV183590738
OOCX01002391
46835
Bacillota
TAA
Leu
>WENV183590096
OOCX01000018
290391
Bacillota
TAC
Val
>WENV183591123
OOCX01019465
290391
Bacillota
TAC
Val
>WENV183591099
OOCX01017533
298270
Bacillota
TAC
Val
>WENV183590493
OOCX01000653
141454
Bacillota
TAG
Leu
>WENV183591098
OOCX01017533
480359
Bacillota
TCC
Gly
>WENV183590495
OOCX01000653
176014
Bacillota
TCT
Arg
>WENV183590441
OOCX01000472
175859
Bacillota
TCT
Arg
>WENV183590563
OOCX01000921
175859
Bacillota
TCT
Arg
>WENV183590614
OOCX01001229
175859
Bacillota
TCT
Arg
>WENV183590902
OOCX01005288
175859
Bacillota
TCT
Arg
>WENV183590553
OOCX01000887
179810
Bacillota
TCT
Arg
>WENV183590384
OOCX01000319
56074
Bacillota
TGA
Ser
>WENV183590830
OOCX01003767
56074
Bacillota
TGA
Ser
>WENV183590892
OOCX01004881
56074
Bacillota
TGA
Ser
>WENV183591182
OOCX01028029
280500
Bacillota
TGC
Ala
>WENV183590249
OOCX01000125
295166
Bacillota
TGC
Ala
>WENV183591244
OOCX01049835
280646
Bacillota
TGC
Ala
>WENV183590911
OOCX01005559
280473
Bacillota
TGG
Pro
>WENV183590926
OOCX01005920
280473
Bacillota
TGG
Pro
>WENV183590491
OOCX01000653
418726
Bacillota
TGT
Thr
>WENV183590215
OOCX01000100
332181
Bacillota
TGT
Thr
>WENV183590407
OOCX01000383
398833
Bacillota
TGT
Thr
>WENV183590589
OOCX01001080
398833
Bacillota
TGT
Thr
>WENV183590653
OOCX01001530
398833
Bacillota
TGT
Thr
>WENV183591120
OOCX01019465
285556
Bacillota
TGT
Thr
>WENV183590727
OOCX01002186
398832
Bacillota
TTC
Glu
>WENV183590496
OOCX01000653
280642
Bacillota
TTG
Gln
>WENV183590418
OOCX01000404
480324
Bacillota
TTG
Gln
>WENV183590532
OOCX01000783
480324
Bacillota
TTG
Gln
>WENV183590683
OOCX01001741
480324
Bacillota
TTG
Gln
>WENV183590698
OOCX01001974
480324
Bacillota
TTG
Gln
>WENV183590487
OOCX01000646
280476
Bacillota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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