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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
73 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183592841
OOCZ01003989
99852
Bacillota
GTA
Tyr
>WENV183593007
OOCZ01008737
343590
Bacillota
GCC
Gly
>WENV183593204
OOCZ01032567
280500
Bacillota
TGC
Ala
>WENV183592840
OOCZ01003989
405363
Bacillota
GCA
Cys
>WENV183593006
OOCZ01008727
290391
Bacillota
TAC
Val
>WENV183592692
OOCZ01001640
280428
Bacillota
GAA
Phe
>WENV183593277
OOCZ01052993
291579
Bacillota
GAA
Phe
>WENV183593276
OOCZ01052993
179917
Bacillota
CAT
Met
>WENV183592674
OOCZ01001426
175842
Bacillota
CAC
Val
>WENV183592476
OOCZ01000382
291629
Bacillota
CCA
Trp
>WENV183593176
OOCZ01025592
179563
Bacillota
GAT
Ile
>WENV183592721
OOCZ01002009
190476
Bacillota
CAT
Met
>WENV183592823
OOCZ01003639
82124
Bacillota
TAA
Leu
>WENV183592590
OOCZ01000903
280447
Bacillota
GAC
Val
>WENV183593020
OOCZ01009410
280447
Bacillota
GAC
Val
>WENV183593120
OOCZ01017178
280447
Bacillota
GAC
Val
>WENV183593157
OOCZ01022275
5692
Bacillota
GCT
Ser
>WENV183592473
OOCZ01000382
186123
Bacillota
GTC
Asp
>WENV183593269
OOCZ01048397
175825
Bacillota
GAT
Ile
>WENV183592553
OOCZ01000744
73009
Bacillota
CAG
Leu
>WENV183592716
OOCZ01001937
73009
Bacillota
CAG
Leu
>WENV183592894
OOCZ01005358
73009
Bacillota
CAG
Leu
>WENV183592939
OOCZ01006489
481217
Bacillota
GCA
Cys
>WENV183593240
OOCZ01041120
189473
Bacillota
GAT
Ile
>WENV183592719
OOCZ01001988
291581
Bacillota
CGG
Pro
>WENV183592471
OOCZ01000381
175859
Bacillota
TCT
Arg
>WENV183592588
OOCZ01000899
175859
Bacillota
TCT
Arg
>WENV183592662
OOCZ01001340
175859
Bacillota
TCT
Arg
>WENV183593268
OOCZ01048397
280436
Bacillota
TGC
Ala
>WENV183592474
OOCZ01000382
291634
Bacillota
GAA
Phe
>WENV183592383
OOCZ01000167
346451
Bacillota
TTT
Lys
>WENV183592415
OOCZ01000232
346451
Bacillota
TTT
Lys
>WENV183592438
OOCZ01000296
480322
Bacillota
CTG
Gln
>WENV183592554
OOCZ01000747
480322
Bacillota
CTG
Gln
>WENV183592816
OOCZ01003539
480322
Bacillota
CTG
Gln
>WENV183593150
OOCZ01020785
401685
Bacillota
TTG
Gln
>WENV183592969
OOCZ01007230
175868
Bacillota
GTT
Asn
>WENV183592505
OOCZ01000513
322848
Bacillota
CTT
Lys
>WENV183592968
OOCZ01007230
398854
Bacillota
CTC
Glu
>WENV183593135
OOCZ01019507
291576
Bacillota
CCC
Gly
>WENV183592658
OOCZ01001333
480324
Bacillota
TTG
Gln
>WENV183592849
OOCZ01004347
480324
Bacillota
TTG
Gln
>WENV183592854
OOCZ01004441
480324
Bacillota
TTG
Gln
>WENV183592947
OOCZ01006778
480324
Bacillota
TTG
Gln
>WENV183593177
OOCZ01025593
497729
Bacillota
CCA
Trp
>WENV183593200
OOCZ01030610
175899
Bacillota
GTC
Asp
>WENV183592403
OOCZ01000201
303718
Bacillota
TGT
Thr
>WENV183592989
OOCZ01007953
56079
Bacillota
AAG
Leu
>WENV183593101
OOCZ01015329
323864
Bacillota
TGC
Ala
>WENV183593109
OOCZ01015848
186051
Bacillota
GAT
Ile
>WENV183592966
OOCZ01007216
398857
Bacillota
TTC
Glu
>WENV183592720
OOCZ01001992
280444
Bacillota
GGT
Thr
>WENV183592870
OOCZ01004674
280444
Bacillota
GGT
Thr
>WENV183593191
OOCZ01028065
342104
Bacillota
TAC
Val
>WENV183592646
OOCZ01001252
179755
Bacillota
CCG
Arg
>WENV183592793
OOCZ01003114
179755
Bacillota
CCG
Arg
>WENV183592988
OOCZ01007889
46835
Bacillota
TAA
Leu
>WENV183592722
OOCZ01002009
398832
Bacillota
TTC
Glu
>WENV183592933
OOCZ01006261
280462
Bacillota
GAA
Phe
>WENV183592978
OOCZ01007625
398852
Bacillota
CTC
Glu
>WENV183593138
OOCZ01019890
398852
Bacillota
CTC
Glu
>WENV183593149
OOCZ01020785
175857
Bacillota
GTG
His
>WENV183592497
OOCZ01000446
398833
Bacillota
TGT
Thr
>WENV183592624
OOCZ01001075
398833
Bacillota
TGT
Thr
>WENV183593226
OOCZ01038017
317820
Bacillota
TAC
Val
>WENV183592934
OOCZ01006261
280463
Bacillota
TTT
Lys
>WENV183592461
OOCZ01000355
405393
Bacillota
GCC
Gly
>WENV183592475
OOCZ01000382
405393
Bacillota
GCC
Gly
>WENV183593156
OOCZ01022275
56074
Bacillota
TGA
Ser
>WENV183592667
OOCZ01001383
280473
Bacillota
TGG
Pro
>WENV183592668
OOCZ01001383
280473
Bacillota
TGG
Pro
>WENV183592876
OOCZ01004793
280473
Bacillota
TGG
Pro
>WENV183593021
OOCZ01009511
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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