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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
53 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183600200
OODI01000527
99852
Bacillota
GTA
Tyr
>WENV183600378
OODI01003475
343590
Bacillota
GCC
Gly
>WENV183600551
OODI01012587
280500
Bacillota
TGC
Ala
>WENV183600217
OODI01000677
405363
Bacillota
GCA
Cys
>WENV183600777
OODI01069384
280428
Bacillota
GAA
Phe
>WENV183600072
OODI01000008
229015
Bacillota
GTG
His
>WENV183600094
OODI01000051
179917
Bacillota
CAT
Met
>WENV183600615
OODI01025233
302145
Bacillota
GAA
Phe
>WENV183600472
OODI01007103
73664
Bacillota
CAG
Leu
>WENV183600213
OODI01000630
280447
Bacillota
GAC
Val
>WENV183600536
OODI01011121
312274
Bacillota
GGC
Ala
>WENV183600242
OODI01000805
186123
Bacillota
GTC
Asp
>WENV183600322
OODI01002029
186123
Bacillota
GTC
Asp
>WENV183600087
OODI01000024
284723
Bacillota
TAC
Val
>WENV183600334
OODI01002194
73009
Bacillota
CAG
Leu
>WENV183600435
OODI01005641
73009
Bacillota
CAG
Leu
>WENV183600443
OODI01005840
189473
Bacillota
GAT
Ile
>WENV183600475
OODI01007338
291581
Bacillota
CGG
Pro
>WENV183600214
OODI01000646
175859
Bacillota
TCT
Arg
>WENV183600326
OODI01002051
175859
Bacillota
TCT
Arg
>WENV183600199
OODI01000521
175831
Bacillota
ACG
Arg
>WENV183600742
OODI01052604
332181
Bacillota
TGT
Thr
>WENV183600071
OODI01000008
179810
Bacillota
TCT
Arg
>WENV183600687
OODI01038312
284627
Bacillota
GAA
Phe
>WENV183600243
OODI01000805
291634
Bacillota
GAA
Phe
>WENV183600295
OODI01001579
346451
Bacillota
TTT
Lys
>WENV183600379
OODI01003520
480322
Bacillota
CTG
Gln
>WENV183600466
OODI01006820
480322
Bacillota
CTG
Gln
>WENV183600474
OODI01007338
480322
Bacillota
CTG
Gln
>WENV183600410
OODI01004526
175868
Bacillota
GTT
Asn
>WENV183600376
OODI01003360
322848
Bacillota
CTT
Lys
>WENV183600409
OODI01004526
398854
Bacillota
CTC
Glu
>WENV183600418
OODI01004780
291576
Bacillota
CCC
Gly
>WENV183600175
OODI01000362
480324
Bacillota
TTG
Gln
>WENV183600296
OODI01001591
480324
Bacillota
TTG
Gln
>WENV183600560
OODI01013142
480324
Bacillota
TTG
Gln
>WENV183600719
OODI01046200
497729
Bacillota
CCA
Trp
>WENV183600701
OODI01041913
303718
Bacillota
TGT
Thr
>WENV183600465
OODI01006784
56079
Bacillota
AAG
Leu
>WENV183600501
OODI01008475
117745
Bacillota
GTA
Tyr
>WENV183600478
OODI01007417
280444
Bacillota
GGT
Thr
>WENV183600244
OODI01000827
342104
Bacillota
TAC
Val
>WENV183600232
OODI01000749
179755
Bacillota
CCG
Arg
>WENV183600196
OODI01000483
398832
Bacillota
TTC
Glu
>WENV183600570
OODI01015353
118669
Bacillota
GTA
Tyr
>WENV183600731
OODI01050659
398852
Bacillota
CTC
Glu
>WENV183600745
OODI01052604
289123
Bacillota
GGT
Thr
>WENV183600252
OODI01000869
280483
Bacillota
GAA
Phe
>WENV183600253
OODI01000869
285756
Bacillota
GCC
Gly
>WENV183600365
OODI01002859
398833
Bacillota
TGT
Thr
>WENV183600477
OODI01007417
175849
Bacillota
GTC
Asp
>WENV183600323
OODI01002029
405393
Bacillota
GCC
Gly
>WENV183600449
OODI01006310
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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