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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
80 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183601389
OODJ01001040
99852
Bacillota
GTA
Tyr
>WENV183602045
OODJ01013052
343590
Bacillota
GCC
Gly
>WENV183601795
OODJ01004656
404076
Bacillota
GCC
Gly
>WENV183602423
OODJ01058431
184504
Bacillota
GTC
Asp
>WENV183601619
OODJ01002484
284746
Bacillota
CTG
Gln
>WENV183601925
OODJ01007820
280492
Bacillota
CTT
Lys
>WENV183601849
OODJ01005840
348419
Bacillota
GTT
Asn
>WENV183601850
OODJ01005840
348419
Bacillota
GTT
Asn
>WENV183602375
OODJ01047352
184497
Bacillota
GGG
Pro
>WENV183601041
OODJ01000172
295166
Bacillota
TGC
Ala
>WENV183601657
OODJ01002886
215243
Bacillota
CAT
Met
>WENV183601921
OODJ01007793
404079
Bacillota
CAT
Met
>WENV183601502
OODJ01001591
190476
Bacillota
CAT
Met
>WENV183601627
OODJ01002544
280447
Bacillota
GAC
Val
>WENV183601781
OODJ01004417
280447
Bacillota
GAC
Val
>WENV183601811
OODJ01005025
280447
Bacillota
GAC
Val
>WENV183601259
OODJ01000557
5692
Bacillota
GCT
Ser
>WENV183601311
OODJ01000767
5692
Bacillota
GCT
Ser
>WENV183601814
OODJ01005043
5692
Bacillota
GCT
Ser
>WENV183601625
OODJ01002529
186123
Bacillota
GTC
Asp
>WENV183601388
OODJ01001040
73009
Bacillota
CAG
Leu
>WENV183601745
OODJ01003973
73009
Bacillota
CAG
Leu
>WENV183602207
OODJ01022857
481217
Bacillota
GCA
Cys
>WENV183601282
OODJ01000651
291581
Bacillota
CGG
Pro
>WENV183601302
OODJ01000715
291581
Bacillota
CGG
Pro
>WENV183601637
OODJ01002658
291581
Bacillota
CGG
Pro
>WENV183602259
OODJ01026360
175859
Bacillota
TCT
Arg
>WENV183602454
OODJ01064420
175831
Bacillota
ACG
Arg
>WENV183601626
OODJ01002529
291634
Bacillota
GAA
Phe
>WENV183602305
OODJ01032964
183957
Bacillota
CCT
Arg
>WENV183601024
OODJ01000147
346451
Bacillota
TTT
Lys
>WENV183601281
OODJ01000651
480322
Bacillota
CTG
Gln
>WENV183601301
OODJ01000715
480322
Bacillota
CTG
Gln
>WENV183601400
OODJ01001105
480322
Bacillota
CTG
Gln
>WENV183601431
OODJ01001270
480322
Bacillota
CTG
Gln
>WENV183601636
OODJ01002658
480322
Bacillota
CTG
Gln
>WENV183601687
OODJ01003173
480322
Bacillota
CTG
Gln
>WENV183601936
OODJ01008249
480322
Bacillota
CTG
Gln
>WENV183601415
OODJ01001189
401685
Bacillota
TTG
Gln
>WENV183601594
OODJ01002245
175868
Bacillota
GTT
Asn
>WENV183601614
OODJ01002429
175868
Bacillota
GTT
Asn
>WENV183601169
OODJ01000394
284744
Bacillota
TTT
Lys
>WENV183601855
OODJ01006099
291576
Bacillota
CCC
Gly
>WENV183601371
OODJ01000985
480324
Bacillota
TTG
Gln
>WENV183602084
OODJ01014918
497729
Bacillota
CCA
Trp
>WENV183602073
OODJ01014278
56079
Bacillota
AAG
Leu
>WENV183602411
OODJ01055681
292374
Bacillota
TGC
Ala
>WENV183601172
OODJ01000394
179935
Bacillota
GTC
Asp
>WENV183601887
OODJ01006873
398857
Bacillota
TTC
Glu
>WENV183601390
OODJ01001042
117745
Bacillota
GTA
Tyr
>WENV183601726
OODJ01003699
280444
Bacillota
GGT
Thr
>WENV183601982
OODJ01010505
280444
Bacillota
GGT
Thr
>WENV183601662
OODJ01002956
317482
Bacillota
TAC
Val
>WENV183601975
OODJ01010253
46643
Bacillota
TGA
Ser
>WENV183602039
OODJ01012851
321753
Bacillota
GCC
Gly
>WENV183601852
OODJ01005883
179755
Bacillota
CCG
Arg
>WENV183601866
OODJ01006270
179755
Bacillota
CCG
Arg
>WENV183601170
OODJ01000394
401111
Bacillota
TTC
Glu
>WENV183602005
OODJ01011825
58120
Bacillota
AAG
Leu
>WENV183602347
OODJ01039736
46835
Bacillota
TAA
Leu
>WENV183601173
OODJ01000394
284742
Bacillota
GAA
Phe
>WENV183601503
OODJ01001591
398832
Bacillota
TTC
Glu
>WENV183601956
OODJ01008883
118669
Bacillota
GTA
Tyr
>WENV183601960
OODJ01008993
398852
Bacillota
CTC
Glu
>WENV183602113
OODJ01016395
398852
Bacillota
CTC
Glu
>WENV183602404
OODJ01054472
201856
Bacillota
GAT
Ile
>WENV183601405
OODJ01001127
289123
Bacillota
GGT
Thr
>WENV183601167
OODJ01000393
184539
Bacillota
TCT
Arg
>WENV183600930
OODJ01000071
280483
Bacillota
GAA
Phe
>WENV183601414
OODJ01001189
175857
Bacillota
GTG
His
>WENV183602100
OODJ01015587
175857
Bacillota
GTG
His
>WENV183600931
OODJ01000071
285756
Bacillota
GCC
Gly
>WENV183601253
OODJ01000548
398833
Bacillota
TGT
Thr
>WENV183600884
OODJ01000039
405393
Bacillota
GCC
Gly
>WENV183601258
OODJ01000557
56074
Bacillota
TGA
Ser
>WENV183601310
OODJ01000767
56074
Bacillota
TGA
Ser
>WENV183601813
OODJ01005043
56074
Bacillota
TGA
Ser
>WENV183601616
OODJ01002460
280473
Bacillota
TGG
Pro
>WENV183601689
OODJ01003224
280473
Bacillota
TGG
Pro
>WENV183602085
OODJ01014927
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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