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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
167 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183602863
OODK01000272
57121
Bacillota
GGA
Ser
>WENV183602798
OODK01000174
99852
Bacillota
GTA
Tyr
>WENV183603360
OODK01003161
99852
Bacillota
GTA
Tyr
>WENV183603074
OODK01000608
176033
Bacillota
CAT
Met
>WENV183603194
OODK01001083
416763
Bacillota
CTC
Glu
>WENV183603488
OODK01009598
280500
Bacillota
TGC
Ala
>WENV183603044
OODK01000545
405363
Bacillota
GCA
Cys
>WENV183602840
OODK01000230
290391
Bacillota
TAC
Val
>WENV183602991
OODK01000445
290391
Bacillota
TAC
Val
>WENV183603438
OODK01005494
290391
Bacillota
TAC
Val
>WENV183603279
OODK01001686
280428
Bacillota
GAA
Phe
>WENV183603349
OODK01002845
280428
Bacillota
GAA
Phe
>WENV183603356
OODK01003120
280428
Bacillota
GAA
Phe
>WENV183602974
OODK01000428
291579
Bacillota
GAA
Phe
>WENV183603530
OODK01015460
179917
Bacillota
CAT
Met
>WENV183602812
OODK01000195
400904
Bacillota
CCT
Arg
>WENV183603041
OODK01000542
280466
Bacillota
TAC
Val
>WENV183603083
OODK01000613
280466
Bacillota
TAC
Val
>WENV183602679
OODK01000081
13634
Bacillota
CGA
Ser
>WENV183602846
OODK01000232
280492
Bacillota
CTT
Lys
>WENV183603108
OODK01000686
280492
Bacillota
CTT
Lys
>WENV183602726
OODK01000112
175842
Bacillota
CAC
Val
>WENV183602856
OODK01000255
175842
Bacillota
CAC
Val
>WENV183603237
OODK01001395
175842
Bacillota
CAC
Val
>WENV183603290
OODK01001737
184497
Bacillota
GGG
Pro
>WENV183603079
OODK01000608
179563
Bacillota
GAT
Ile
>WENV183603176
OODK01000939
179563
Bacillota
GAT
Ile
>WENV183602944
OODK01000386
179176
Bacillota
ACG
Arg
>WENV183603426
OODK01005074
295166
Bacillota
TGC
Ala
>WENV183602709
OODK01000099
190476
Bacillota
CAT
Met
>WENV183602900
OODK01000333
190476
Bacillota
CAT
Met
>WENV183603040
OODK01000542
399153
Bacillota
TTC
Glu
>WENV183602671
OODK01000071
280447
Bacillota
GAC
Val
>WENV183602754
OODK01000149
280447
Bacillota
GAC
Val
>WENV183602971
OODK01000426
280447
Bacillota
GAC
Val
>WENV183603021
OODK01000477
280447
Bacillota
GAC
Val
>WENV183603143
OODK01000782
280447
Bacillota
GAC
Val
>WENV183603162
OODK01000892
280447
Bacillota
GAC
Val
>WENV183603180
OODK01000998
280447
Bacillota
GAC
Val
>WENV183602756
OODK01000149
5692
Bacillota
GCT
Ser
>WENV183602807
OODK01000184
5692
Bacillota
GCT
Ser
>WENV183602927
OODK01000372
5692
Bacillota
GCT
Ser
>WENV183602648
OODK01000057
400905
Bacillota
CCG
Arg
>WENV183603076
OODK01000608
184171
Bacillota
CAT
Met
>WENV183603375
OODK01003628
284723
Bacillota
TAC
Val
>WENV183602663
OODK01000065
73009
Bacillota
CAG
Leu
>WENV183602797
OODK01000173
73009
Bacillota
CAG
Leu
>WENV183602799
OODK01000174
73009
Bacillota
CAG
Leu
>WENV183602857
OODK01000258
73009
Bacillota
CAG
Leu
>WENV183603085
OODK01000614
73009
Bacillota
CAG
Leu
>WENV183603090
OODK01000626
73009
Bacillota
CAG
Leu
>WENV183603210
OODK01001197
481217
Bacillota
GCA
Cys
>WENV183603261
OODK01001581
481217
Bacillota
GCA
Cys
>WENV183602722
OODK01000110
407726
Bacillota
CTG
Gln
>WENV183603463
OODK01007021
407726
Bacillota
CTG
Gln
>WENV183602666
OODK01000065
291581
Bacillota
CGG
Pro
>WENV183602705
OODK01000098
291581
Bacillota
CGG
Pro
>WENV183602742
OODK01000130
175859
Bacillota
TCT
Arg
>WENV183602771
OODK01000162
175859
Bacillota
TCT
Arg
>WENV183602854
OODK01000255
175859
Bacillota
TCT
Arg
>WENV183602896
OODK01000311
175859
Bacillota
TCT
Arg
>WENV183602761
OODK01000152
398835
Bacillota
GCC
Gly
>WENV183603525
OODK01015123
398835
Bacillota
GCC
Gly
>WENV183603140
OODK01000770
21311
Bacillota
GCT
Ser
>WENV183602708
OODK01000099
175831
Bacillota
ACG
Arg
>WENV183602899
OODK01000322
175831
Bacillota
ACG
Arg
>WENV183603132
OODK01000742
175831
Bacillota
ACG
Arg
>WENV183603024
OODK01000486
187589
Bacillota
CAT
Met
>WENV183603071
OODK01000608
179130
Bacillota
ACG
Arg
>WENV183603242
OODK01001459
294020
Bacillota
TAC
Val
>WENV183603487
OODK01009598
175916
Bacillota
GAT
Ile
>WENV183602665
OODK01000065
480322
Bacillota
CTG
Gln
>WENV183602704
OODK01000098
480322
Bacillota
CTG
Gln
>WENV183602791
OODK01000166
480322
Bacillota
CTG
Gln
>WENV183602803
OODK01000179
480322
Bacillota
CTG
Gln
>WENV183603050
OODK01000577
480322
Bacillota
CTG
Gln
>WENV183602869
OODK01000274
284389
Bacillota
CTT
Lys
>WENV183603286
OODK01001698
401685
Bacillota
TTG
Gln
>WENV183602767
OODK01000157
175868
Bacillota
GTT
Asn
>WENV183602816
OODK01000198
175868
Bacillota
GTT
Asn
>WENV183602946
OODK01000388
175868
Bacillota
GTT
Asn
>WENV183603220
OODK01001263
175868
Bacillota
GTT
Asn
>WENV183603240
OODK01001443
175868
Bacillota
GTT
Asn
>WENV183603296
OODK01001805
175868
Bacillota
GTT
Asn
>WENV183602766
OODK01000157
398854
Bacillota
CTC
Glu
>WENV183602815
OODK01000198
398854
Bacillota
CTC
Glu
>WENV183602945
OODK01000388
398854
Bacillota
CTC
Glu
>WENV183603149
OODK01000825
398854
Bacillota
CTC
Glu
>WENV183603035
OODK01000526
291576
Bacillota
CCC
Gly
>WENV183603147
OODK01000793
291576
Bacillota
CCC
Gly
>WENV183603184
OODK01001016
291576
Bacillota
CCC
Gly
>WENV183602664
OODK01000065
480324
Bacillota
TTG
Gln
>WENV183602706
OODK01000098
480324
Bacillota
TTG
Gln
>WENV183602839
OODK01000230
180688
Bacillota
GTC
Asp
>WENV183603437
OODK01005494
180688
Bacillota
GTC
Asp
>WENV183603344
OODK01002565
175899
Bacillota
GTC
Asp
>WENV183603414
OODK01004889
175899
Bacillota
GTC
Asp
>WENV183603546
OODK01018179
175899
Bacillota
GTC
Asp
>WENV183602633
OODK01000049
73638
Bacillota
AAG
Leu
>WENV183603186
OODK01001053
56079
Bacillota
AAG
Leu
>WENV183603187
OODK01001053
56079
Bacillota
AAG
Leu
>WENV183602989
OODK01000444
398857
Bacillota
TTC
Glu
>WENV183602725
OODK01000112
280444
Bacillota
GGT
Thr
>WENV183602727
OODK01000112
280444
Bacillota
GGT
Thr
>WENV183602964
OODK01000414
280444
Bacillota
GGT
Thr
>WENV183602968
OODK01000414
280444
Bacillota
GGT
Thr
>WENV183603017
OODK01000471
280444
Bacillota
GGT
Thr
>WENV183603170
OODK01000927
280444
Bacillota
GGT
Thr
>WENV183602825
OODK01000209
46643
Bacillota
TGA
Ser
>WENV183602707
OODK01000099
179755
Bacillota
CCG
Arg
>WENV183603042
OODK01000543
179755
Bacillota
CCG
Arg
>WENV183603185
OODK01001027
179755
Bacillota
CCG
Arg
>WENV183603239
OODK01001426
179755
Bacillota
CCG
Arg
>WENV183603492
OODK01010026
179755
Bacillota
CCG
Arg
>WENV183603101
OODK01000659
58120
Bacillota
AAG
Leu
>WENV183602878
OODK01000292
198522
Bacillota
GAT
Ile
>WENV183602879
OODK01000292
198522
Bacillota
GAT
Ile
>WENV183602852
OODK01000250
46835
Bacillota
TAA
Leu
>WENV183602935
OODK01000377
46835
Bacillota
TAA
Leu
>WENV183603053
OODK01000588
46835
Bacillota
TAA
Leu
>WENV183603346
OODK01002565
46835
Bacillota
TAA
Leu
>WENV183602710
OODK01000099
398832
Bacillota
TTC
Glu
>WENV183602901
OODK01000333
398832
Bacillota
TTC
Glu
>WENV183602911
OODK01000351
398832
Bacillota
TTC
Glu
>WENV183602678
OODK01000081
74725
Bacillota
CAG
Leu
>WENV183603137
OODK01000748
284390
Bacillota
CGT
Thr
>WENV183603265
OODK01001597
283367
Bacillota
GCC
Gly
>WENV183603382
OODK01003796
283367
Bacillota
GCC
Gly
>WENV183603428
OODK01005163
283367
Bacillota
GCC
Gly
>WENV183602826
OODK01000211
280561
Bacillota
CAT
Met
>WENV183602835
OODK01000227
280476
Bacillota
TTT
Lys
>WENV183602921
OODK01000365
280476
Bacillota
TTT
Lys
>WENV183602979
OODK01000435
280476
Bacillota
TTT
Lys
>WENV183603182
OODK01001013
280476
Bacillota
TTT
Lys
>WENV183603467
OODK01007066
280476
Bacillota
TTT
Lys
>WENV183603506
OODK01012899
280476
Bacillota
TTT
Lys
>WENV183603088
OODK01000620
280462
Bacillota
GAA
Phe
>WENV183602809
OODK01000186
398852
Bacillota
CTC
Glu
>WENV183603030
OODK01000503
398852
Bacillota
CTC
Glu
>WENV183603287
OODK01001698
309916
Bacillota
TTT
Lys
>WENV183603178
OODK01000939
480366
Bacillota
GGT
Thr
>WENV183603411
OODK01004745
280483
Bacillota
GAA
Phe
>WENV183602939
OODK01000384
298260
Bacillota
GTT
Asn
>WENV183602882
OODK01000292
285601
Bacillota
TTC
Glu
>WENV183603285
OODK01001698
175857
Bacillota
GTG
His
>WENV183603450
OODK01006121
175857
Bacillota
GTG
His
>WENV183603412
OODK01004745
285756
Bacillota
GCC
Gly
>WENV183603070
OODK01000608
47847
Bacillota
TAA
Leu
>WENV183602621
OODK01000037
398833
Bacillota
TGT
Thr
>WENV183602669
OODK01000068
398833
Bacillota
TGT
Thr
>WENV183603145
OODK01000791
398833
Bacillota
TGT
Thr
>WENV183602841
OODK01000230
285556
Bacillota
TGT
Thr
>WENV183602724
OODK01000112
175849
Bacillota
GTC
Asp
>WENV183602967
OODK01000414
175849
Bacillota
GTC
Asp
>WENV183603169
OODK01000927
175849
Bacillota
GTC
Asp
>WENV183603281
OODK01001686
175849
Bacillota
GTC
Asp
>WENV183603355
OODK01003120
175849
Bacillota
GTC
Asp
>WENV183603464
OODK01007066
179166
Bacillota
TCT
Arg
>WENV183603500
OODK01011265
280486
Bacillota
TGC
Ala
>WENV183603515
OODK01013843
280486
Bacillota
TGC
Ala
>WENV183603066
OODK01000608
284680
Bacillota
TTT
Lys
>WENV183602755
OODK01000149
56074
Bacillota
TGA
Ser
>WENV183602806
OODK01000184
56074
Bacillota
TGA
Ser
>WENV183602926
OODK01000372
56074
Bacillota
TGA
Ser
>WENV183603139
OODK01000756
280473
Bacillota
TGG
Pro
>WENV183603288
OODK01001718
280473
Bacillota
TGG
Pro
>WENV183603289
OODK01001726
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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