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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
77 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183604413
OODL01004692
99852
Bacillota
GTA
Tyr
>WENV183604554
OODL01010264
280500
Bacillota
TGC
Ala
>WENV183604412
OODL01004692
405363
Bacillota
GCA
Cys
>WENV183604731
OODL01041185
280428
Bacillota
GAA
Phe
>WENV183604257
OODL01002025
175842
Bacillota
CAC
Val
>WENV183603738
OODL01000165
291629
Bacillota
CCA
Trp
>WENV183604477
OODL01006767
179176
Bacillota
ACG
Arg
>WENV183604648
OODL01022249
295166
Bacillota
TGC
Ala
>WENV183604011
OODL01000818
190476
Bacillota
CAT
Met
>WENV183604006
OODL01000800
73664
Bacillota
CAG
Leu
>WENV183604219
OODL01001751
280447
Bacillota
GAC
Val
>WENV183604256
OODL01002022
280447
Bacillota
GAC
Val
>WENV183604291
OODL01002414
280447
Bacillota
GAC
Val
>WENV183604315
OODL01002814
280447
Bacillota
GAC
Val
>WENV183604345
OODL01003204
280447
Bacillota
GAC
Val
>WENV183604379
OODL01003775
280447
Bacillota
GAC
Val
>WENV183604398
OODL01004235
5692
Bacillota
GCT
Ser
>WENV183604628
OODL01018657
5692
Bacillota
GCT
Ser
>WENV183604154
OODL01001373
186123
Bacillota
GTC
Asp
>WENV183603820
OODL01000282
73009
Bacillota
CAG
Leu
>WENV183604225
OODL01001792
73009
Bacillota
CAG
Leu
>WENV183604376
OODL01003688
73009
Bacillota
CAG
Leu
>WENV183603861
OODL01000369
291581
Bacillota
CGG
Pro
>WENV183604190
OODL01001552
291581
Bacillota
CGG
Pro
>WENV183604234
OODL01001880
291581
Bacillota
CGG
Pro
>WENV183603913
OODL01000488
175859
Bacillota
TCT
Arg
>WENV183603998
OODL01000767
175859
Bacillota
TCT
Arg
>WENV183604294
OODL01002479
175859
Bacillota
TCT
Arg
>WENV183604388
OODL01003941
175831
Bacillota
ACG
Arg
>WENV183604328
OODL01002992
179810
Bacillota
TCT
Arg
>WENV183604155
OODL01001373
291634
Bacillota
GAA
Phe
>WENV183604524
OODL01008614
294020
Bacillota
TAC
Val
>WENV183604633
OODL01019777
293309
Bacillota
GTT
Asn
>WENV183604769
OODL01052061
482449
Bacillota
TCC
Gly
>WENV183603860
OODL01000369
480322
Bacillota
CTG
Gln
>WENV183604023
OODL01000852
480322
Bacillota
CTG
Gln
>WENV183604110
OODL01001185
480322
Bacillota
CTG
Gln
>WENV183604189
OODL01001552
480322
Bacillota
CTG
Gln
>WENV183604233
OODL01001880
480322
Bacillota
CTG
Gln
>WENV183604265
OODL01002087
480322
Bacillota
CTG
Gln
>WENV183604739
OODL01043345
401685
Bacillota
TTG
Gln
>WENV183604402
OODL01004399
175868
Bacillota
GTT
Asn
>WENV183604141
OODL01001352
291576
Bacillota
CCC
Gly
>WENV183604428
OODL01005107
291576
Bacillota
CCC
Gly
>WENV183604674
OODL01028797
287280
Bacillota
TGT
Thr
>WENV183604065
OODL01000994
480324
Bacillota
TTG
Gln
>WENV183604188
OODL01001552
480324
Bacillota
TTG
Gln
>WENV183604235
OODL01001880
480324
Bacillota
TTG
Gln
>WENV183604417
OODL01004704
56079
Bacillota
AAG
Leu
>WENV183604671
OODL01028742
175911
Bacillota
GTC
Asp
>WENV183604754
OODL01045823
292374
Bacillota
TGC
Ala
>WENV183604673
OODL01028797
398857
Bacillota
TTC
Glu
>WENV183604102
OODL01001146
117745
Bacillota
GTA
Tyr
>WENV183603823
OODL01000282
280444
Bacillota
GGT
Thr
>WENV183604099
OODL01001143
280444
Bacillota
GGT
Thr
>WENV183604140
OODL01001343
280444
Bacillota
GGT
Thr
>WENV183604383
OODL01003796
280444
Bacillota
GGT
Thr
>WENV183604160
OODL01001410
179755
Bacillota
CCG
Arg
>WENV183604267
OODL01002112
179755
Bacillota
CCG
Arg
>WENV183604525
OODL01008614
46835
Bacillota
TAA
Leu
>WENV183604012
OODL01000818
398832
Bacillota
TTC
Glu
>WENV183604464
OODL01006233
280462
Bacillota
GAA
Phe
>WENV183604283
OODL01002297
398852
Bacillota
CTC
Glu
>WENV183603555
OODL01000001
289123
Bacillota
GGT
Thr
>WENV183604114
OODL01001191
280483
Bacillota
GAA
Phe
>WENV183604329
OODL01002992
175857
Bacillota
GTG
His
>WENV183604115
OODL01001191
285756
Bacillota
GCC
Gly
>WENV183604015
OODL01000842
398833
Bacillota
TGT
Thr
>WENV183604250
OODL01001960
398833
Bacillota
TGT
Thr
>WENV183603822
OODL01000282
175849
Bacillota
GTC
Asp
>WENV183604382
OODL01003796
175849
Bacillota
GTC
Asp
>WENV183604331
OODL01002992
280463
Bacillota
TTT
Lys
>WENV183603660
OODL01000054
405393
Bacillota
GCC
Gly
>WENV183604397
OODL01004235
56074
Bacillota
TGA
Ser
>WENV183604627
OODL01018657
56074
Bacillota
TGA
Ser
>WENV183604387
OODL01003920
280473
Bacillota
TGG
Pro
>WENV183604517
OODL01008165
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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