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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
43 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183609825
OODR01004015
99852
Bacillota
GTA
Tyr
>WENV183609900
OODR01008398
280500
Bacillota
TGC
Ala
>WENV183609748
OODR01002031
405363
Bacillota
GCA
Cys
>WENV183609634
OODR01000416
179917
Bacillota
CAT
Met
>WENV183609771
OODR01002564
280466
Bacillota
TAC
Val
>WENV183609957
OODR01013935
175842
Bacillota
CAC
Val
>WENV183609677
OODR01000819
291629
Bacillota
CCA
Trp
>WENV183609890
OODR01007687
215243
Bacillota
CAT
Met
>WENV183609793
OODR01003402
190476
Bacillota
CAT
Met
>WENV183609705
OODR01001062
280447
Bacillota
GAC
Val
>WENV183609978
OODR01016333
5692
Bacillota
GCT
Ser
>WENV183609674
OODR01000819
186123
Bacillota
GTC
Asp
>WENV183609768
OODR01002518
284723
Bacillota
TAC
Val
>WENV183609725
OODR01001434
73009
Bacillota
CAG
Leu
>WENV183610072
OODR01038012
175847
Bacillota
GTC
Asp
>WENV183609656
OODR01000567
175831
Bacillota
ACG
Arg
>WENV183610045
OODR01032604
332181
Bacillota
TGT
Thr
>WENV183609579
OODR01000159
179810
Bacillota
TCT
Arg
>WENV183609675
OODR01000819
291634
Bacillota
GAA
Phe
>WENV183609728
OODR01001499
294020
Bacillota
TAC
Val
>WENV183609874
OODR01006869
295350
Bacillota
TGC
Ala
>WENV183609766
OODR01002493
480322
Bacillota
CTG
Gln
>WENV183609776
OODR01002713
480322
Bacillota
CTG
Gln
>WENV183609714
OODR01001193
175868
Bacillota
GTT
Asn
>WENV183609713
OODR01001193
398854
Bacillota
CTC
Glu
>WENV183609745
OODR01001843
291576
Bacillota
CCC
Gly
>WENV183609711
OODR01001187
480324
Bacillota
TTG
Gln
>WENV183609859
OODR01006106
175911
Bacillota
GTC
Asp
>WENV183609862
OODR01006138
292374
Bacillota
TGC
Ala
>WENV183609968
OODR01015430
292374
Bacillota
TGC
Ala
>WENV183609947
OODR01012817
398857
Bacillota
TTC
Glu
>WENV183609773
OODR01002564
280444
Bacillota
GGT
Thr
>WENV183609770
OODR01002564
321753
Bacillota
GCC
Gly
>WENV183609867
OODR01006316
46835
Bacillota
TAA
Leu
>WENV183609861
OODR01006138
201856
Bacillota
GAT
Ile
>WENV183609967
OODR01015430
201856
Bacillota
GAT
Ile
>WENV183610048
OODR01032604
289123
Bacillota
GGT
Thr
>WENV183609719
OODR01001257
280483
Bacillota
GAA
Phe
>WENV183609720
OODR01001257
285756
Bacillota
GCC
Gly
>WENV183609654
OODR01000550
398833
Bacillota
TGT
Thr
>WENV183609772
OODR01002564
175849
Bacillota
GTC
Asp
>WENV183609676
OODR01000819
405393
Bacillota
GCC
Gly
>WENV183609889
OODR01007548
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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