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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
84 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183610695
OODS01004127
99852
Bacillota
GTA
Tyr
>WENV183610927
OODS01016806
280500
Bacillota
TGC
Ala
>WENV183610529
OODS01001626
405363
Bacillota
GCA
Cys
>WENV183610973
OODS01022973
290391
Bacillota
TAC
Val
>WENV183610287
OODS01000315
280428
Bacillota
GAA
Phe
>WENV183610938
OODS01018882
291579
Bacillota
GAA
Phe
>WENV183610987
OODS01024907
175842
Bacillota
CAC
Val
>WENV183610270
OODS01000280
291629
Bacillota
CCA
Trp
>WENV183610643
OODS01003008
184497
Bacillota
GGG
Pro
>WENV183610564
OODS01001948
179176
Bacillota
ACG
Arg
>WENV183610756
OODS01005976
179176
Bacillota
ACG
Arg
>WENV183610878
OODS01011813
295166
Bacillota
TGC
Ala
>WENV183610486
OODS01001282
190476
Bacillota
CAT
Met
>WENV183610668
OODS01003511
190476
Bacillota
CAT
Met
>WENV183610412
OODS01000792
280447
Bacillota
GAC
Val
>WENV183610610
OODS01002412
280447
Bacillota
GAC
Val
>WENV183610684
OODS01003723
280447
Bacillota
GAC
Val
>WENV183610771
OODS01006400
280447
Bacillota
GAC
Val
>WENV183610362
OODS01000524
5692
Bacillota
GCT
Ser
>WENV183610716
OODS01004542
5692
Bacillota
GCT
Ser
>WENV183610889
OODS01012935
312274
Bacillota
GGC
Ala
>WENV183610859
OODS01010345
186123
Bacillota
GTC
Asp
>WENV183610228
OODS01000193
73009
Bacillota
CAG
Leu
>WENV183610347
OODS01000487
73009
Bacillota
CAG
Leu
>WENV183610627
OODS01002691
73009
Bacillota
CAG
Leu
>WENV183610948
OODS01020375
407726
Bacillota
CTG
Gln
>WENV183610394
OODS01000682
291581
Bacillota
CGG
Pro
>WENV183610672
OODS01003573
291581
Bacillota
CGG
Pro
>WENV183610761
OODS01006049
291581
Bacillota
CGG
Pro
>WENV183610276
OODS01000298
175859
Bacillota
TCT
Arg
>WENV183611042
OODS01035621
398835
Bacillota
GCC
Gly
>WENV183610446
OODS01000978
175831
Bacillota
ACG
Arg
>WENV183610979
OODS01023707
332181
Bacillota
TGT
Thr
>WENV183610964
OODS01021777
179130
Bacillota
ACG
Arg
>WENV183610429
OODS01000869
284627
Bacillota
GAA
Phe
>WENV183610860
OODS01010345
291634
Bacillota
GAA
Phe
>WENV183610352
OODS01000499
294020
Bacillota
TAC
Val
>WENV183610704
OODS01004332
294020
Bacillota
TAC
Val
>WENV183610926
OODS01016806
175916
Bacillota
GAT
Ile
>WENV183610393
OODS01000682
480322
Bacillota
CTG
Gln
>WENV183610419
OODS01000823
480322
Bacillota
CTG
Gln
>WENV183610437
OODS01000906
480322
Bacillota
CTG
Gln
>WENV183610560
OODS01001884
480322
Bacillota
CTG
Gln
>WENV183610671
OODS01003573
480322
Bacillota
CTG
Gln
>WENV183610760
OODS01006049
480322
Bacillota
CTG
Gln
>WENV183610537
OODS01001663
175868
Bacillota
GTT
Asn
>WENV183610742
OODS01005308
175868
Bacillota
GTT
Asn
>WENV183610496
OODS01001363
291576
Bacillota
CCC
Gly
>WENV183610392
OODS01000682
480324
Bacillota
TTG
Gln
>WENV183610530
OODS01001626
480324
Bacillota
TTG
Gln
>WENV183610913
OODS01015137
73638
Bacillota
AAG
Leu
>WENV183611046
OODS01036958
292374
Bacillota
TGC
Ala
>WENV183610947
OODS01020318
186051
Bacillota
GAT
Ile
>WENV183610186
OODS01000122
398857
Bacillota
TTC
Glu
>WENV183610441
OODS01000929
280444
Bacillota
GGT
Thr
>WENV183610562
OODS01001921
280444
Bacillota
GGT
Thr
>WENV183611054
OODS01037276
319100
Bacillota
GTG
His
>WENV183610288
OODS01000315
321753
Bacillota
GCC
Gly
>WENV183610307
OODS01000347
321753
Bacillota
GCC
Gly
>WENV183610740
OODS01005207
179755
Bacillota
CCG
Arg
>WENV183610755
OODS01005973
179755
Bacillota
CCG
Arg
>WENV183610924
OODS01016554
179755
Bacillota
CCG
Arg
>WENV183610686
OODS01003815
58120
Bacillota
AAG
Leu
>WENV183610444
OODS01000960
398832
Bacillota
TTC
Glu
>WENV183610487
OODS01001282
398832
Bacillota
TTC
Glu
>WENV183610669
OODS01003511
398832
Bacillota
TTC
Glu
>WENV183610113
OODS01000029
118669
Bacillota
GTA
Tyr
>WENV183610491
OODS01001309
118669
Bacillota
GTA
Tyr
>WENV183610087
OODS01000002
398852
Bacillota
CTC
Glu
>WENV183611045
OODS01036958
201856
Bacillota
GAT
Ile
>WENV183610982
OODS01023707
289123
Bacillota
GGT
Thr
>WENV183610960
OODS01021777
118370
Bacillota
TAG
Leu
>WENV183610566
OODS01002026
321248
Bacillota
TAC
Val
>WENV183610963
OODS01021777
47847
Bacillota
TAA
Leu
>WENV183610330
OODS01000431
398833
Bacillota
TGT
Thr
>WENV183610866
OODS01011095
285556
Bacillota
TGT
Thr
>WENV183611089
OODS01048262
175849
Bacillota
GTC
Asp
>WENV183611014
OODS01030011
280486
Bacillota
TGC
Ala
>WENV183610252
OODS01000240
405393
Bacillota
GCC
Gly
>WENV183610361
OODS01000524
56074
Bacillota
TGA
Ser
>WENV183610715
OODS01004542
56074
Bacillota
TGA
Ser
>WENV183610445
OODS01000976
280473
Bacillota
TGG
Pro
>WENV183610654
OODS01003165
280473
Bacillota
TGG
Pro
>WENV183610812
OODS01008328
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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