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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
139 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183611935
OODT01002364
99852
Bacillota
GTA
Tyr
>WENV183611316
OODT01000119
343590
Bacillota
GCC
Gly
>WENV183611955
OODT01002602
343590
Bacillota
GCC
Gly
>WENV183611956
OODT01002602
343590
Bacillota
GCC
Gly
>WENV183612199
OODT01017007
343590
Bacillota
GCC
Gly
>WENV183612069
OODT01004874
280500
Bacillota
TGC
Ala
>WENV183612197
OODT01016419
280500
Bacillota
TGC
Ala
>WENV183611653
OODT01000717
349107
Bacillota
GCC
Gly
>WENV183611657
OODT01000717
349107
Bacillota
GCC
Gly
>WENV183611931
OODT01002364
349107
Bacillota
GCC
Gly
>WENV183611933
OODT01002364
349107
Bacillota
GCC
Gly
>WENV183611965
OODT01002768
349107
Bacillota
GCC
Gly
>WENV183611983
OODT01003033
349107
Bacillota
GCC
Gly
>WENV183611992
OODT01003236
349107
Bacillota
GCC
Gly
>WENV183611934
OODT01002364
405363
Bacillota
GCA
Cys
>WENV183611656
OODT01000717
280428
Bacillota
GAA
Phe
>WENV183611930
OODT01002364
280428
Bacillota
GAA
Phe
>WENV183611964
OODT01002768
280428
Bacillota
GAA
Phe
>WENV183612163
OODT01014096
480359
Bacillota
TCC
Gly
>WENV183612202
OODT01017223
480359
Bacillota
TCC
Gly
>WENV183611572
OODT01000536
179917
Bacillota
CAT
Met
>WENV183611595
OODT01000574
302145
Bacillota
GAA
Phe
>WENV183611654
OODT01000717
280466
Bacillota
TAC
Val
>WENV183611830
OODT01001482
280466
Bacillota
TAC
Val
>WENV183611855
OODT01001615
175842
Bacillota
CAC
Val
>WENV183611985
OODT01003089
175842
Bacillota
CAC
Val
>WENV183611458
OODT01000287
184497
Bacillota
GGG
Pro
>WENV183612167
OODT01014096
459011
Bacillota
TGT
Thr
>WENV183612162
OODT01014096
398915
Bacillota
TTC
Glu
>WENV183612201
OODT01017223
398915
Bacillota
TTC
Glu
>WENV183611210
OODT01000046
179176
Bacillota
ACG
Arg
>WENV183611404
OODT01000219
179176
Bacillota
ACG
Arg
>WENV183611978
OODT01002843
179176
Bacillota
ACG
Arg
>WENV183611843
OODT01001562
352588
Bacillota
CAT
Met
>WENV183611544
OODT01000481
184687
Bacillota
CAT
Met
>WENV183612244
OODT01025514
176014
Bacillota
TCT
Arg
>WENV183611171
OODT01000026
82124
Bacillota
TAA
Leu
>WENV183611770
OODT01001105
82124
Bacillota
TAA
Leu
>WENV183611221
OODT01000055
73664
Bacillota
CAG
Leu
>WENV183611232
OODT01000064
73664
Bacillota
CAG
Leu
>WENV183611337
OODT01000138
73664
Bacillota
CAG
Leu
>WENV183611841
OODT01001556
280447
Bacillota
GAC
Val
>WENV183612001
OODT01003393
280447
Bacillota
GAC
Val
>WENV183611953
OODT01002543
5692
Bacillota
GCT
Ser
>WENV183611703
OODT01000917
73009
Bacillota
CAG
Leu
>WENV183611783
OODT01001176
73009
Bacillota
CAG
Leu
>WENV183611812
OODT01001437
73009
Bacillota
CAG
Leu
>WENV183612120
OODT01009127
73009
Bacillota
CAG
Leu
>WENV183611885
OODT01001836
481217
Bacillota
GCA
Cys
>WENV183611753
OODT01001028
291581
Bacillota
CGG
Pro
>WENV183611823
OODT01001456
291581
Bacillota
CGG
Pro
>WENV183611734
OODT01000973
175859
Bacillota
TCT
Arg
>WENV183611768
OODT01001105
175847
Bacillota
GTC
Asp
>WENV183611814
OODT01001441
175847
Bacillota
GTC
Asp
>WENV183612172
OODT01014654
175847
Bacillota
GTC
Asp
>WENV183612166
OODT01014096
280641
Bacillota
GTT
Asn
>WENV183611863
OODT01001687
175831
Bacillota
ACG
Arg
>WENV183611890
OODT01001848
175831
Bacillota
ACG
Arg
>WENV183612032
OODT01004040
179810
Bacillota
TCT
Arg
>WENV183611415
OODT01000229
284627
Bacillota
GAA
Phe
>WENV183611591
OODT01000568
284627
Bacillota
GAA
Phe
>WENV183612095
OODT01006120
195824
Bacillota
GAT
Ile
>WENV183611508
OODT01000382
27216
Bacillota
GCT
Ser
>WENV183611233
OODT01000065
484885
Bacillota
TCC
Gly
>WENV183611336
OODT01000138
484885
Bacillota
TCC
Gly
>WENV183611690
OODT01000866
480322
Bacillota
CTG
Gln
>WENV183611752
OODT01001028
480322
Bacillota
CTG
Gln
>WENV183611822
OODT01001456
480322
Bacillota
CTG
Gln
>WENV183611852
OODT01001582
480322
Bacillota
CTG
Gln
>WENV183611218
OODT01000052
187364
Bacillota
CAT
Met
>WENV183611924
OODT01002287
187364
Bacillota
CAT
Met
>WENV183611618
OODT01000620
401685
Bacillota
TTG
Gln
>WENV183611700
OODT01000914
401685
Bacillota
TTG
Gln
>WENV183611945
OODT01002475
401685
Bacillota
TTG
Gln
>WENV183611607
OODT01000601
175868
Bacillota
GTT
Asn
>WENV183611850
OODT01001578
175868
Bacillota
GTT
Asn
>WENV183611891
OODT01001881
175868
Bacillota
GTT
Asn
>WENV183611903
OODT01002001
175868
Bacillota
GTT
Asn
>WENV183611849
OODT01001578
398854
Bacillota
CTC
Glu
>WENV183611902
OODT01002001
398854
Bacillota
CTC
Glu
>WENV183611900
OODT01001989
291576
Bacillota
CCC
Gly
>WENV183611871
OODT01001717
480324
Bacillota
TTG
Gln
>WENV183611937
OODT01002428
480324
Bacillota
TTG
Gln
>WENV183612103
OODT01007627
400963
Bacillota
GTT
Asn
>WENV183611303
OODT01000106
497729
Bacillota
CCA
Trp
>WENV183611550
OODT01000487
497729
Bacillota
CCA
Trp
>WENV183611630
OODT01000642
497729
Bacillota
CCA
Trp
>WENV183611736
OODT01000977
497729
Bacillota
CCA
Trp
>WENV183611743
OODT01000991
497729
Bacillota
CCA
Trp
>WENV183611808
OODT01001385
497729
Bacillota
CCA
Trp
>WENV183611906
OODT01002041
175899
Bacillota
GTC
Asp
>WENV183611884
OODT01001836
398857
Bacillota
TTC
Glu
>WENV183611887
OODT01001836
398857
Bacillota
TTC
Glu
>WENV183611757
OODT01001054
280444
Bacillota
GGT
Thr
>WENV183611759
OODT01001054
280444
Bacillota
GGT
Thr
>WENV183611842
OODT01001559
280444
Bacillota
GGT
Thr
>WENV183611847
OODT01001570
280444
Bacillota
GGT
Thr
>WENV183611708
OODT01000929
483485
Bacillota
CCC
Gly
>WENV183612091
OODT01005861
291597
Bacillota
TGC
Ala
>WENV183611796
OODT01001307
342104
Bacillota
TAC
Val
>WENV183611988
OODT01003161
179755
Bacillota
CCG
Arg
>WENV183611996
OODT01003360
179755
Bacillota
CCG
Arg
>WENV183611209
OODT01000046
46835
Bacillota
TAA
Leu
>WENV183611565
OODT01000527
46835
Bacillota
TAA
Leu
>WENV183612027
OODT01003936
46835
Bacillota
TAA
Leu
>WENV183612117
OODT01008254
46835
Bacillota
TAA
Leu
>WENV183612165
OODT01014096
235661
Bacillota
GTC
Asp
>WENV183611170
OODT01000026
118669
Bacillota
GTA
Tyr
>WENV183611323
OODT01000127
118669
Bacillota
GTA
Tyr
>WENV183611413
OODT01000229
118669
Bacillota
GTA
Tyr
>WENV183611512
OODT01000394
118669
Bacillota
GTA
Tyr
>WENV183611589
OODT01000568
118669
Bacillota
GTA
Tyr
>WENV183612175
OODT01014654
118669
Bacillota
GTA
Tyr
>WENV183611208
OODT01000046
175915
Bacillota
GTC
Asp
>WENV183611488
OODT01000342
52748
Bacillota
TGA
Ser
>WENV183612224
OODT01022219
52748
Bacillota
TGA
Ser
>WENV183611537
OODT01000449
280476
Bacillota
TTT
Lys
>WENV183611134
OODT01000012
398852
Bacillota
CTC
Glu
>WENV183611135
OODT01000012
398852
Bacillota
CTC
Glu
>WENV183611136
OODT01000012
398852
Bacillota
CTC
Glu
>WENV183611423
OODT01000238
360353
Bacillota
CTT
Lys
>WENV183611798
OODT01001307
280483
Bacillota
GAA
Phe
>WENV183611834
OODT01001505
298260
Bacillota
GTT
Asn
>WENV183611205
OODT01000045
406186
Bacillota
CTC
Glu
>WENV183611206
OODT01000045
406186
Bacillota
CTC
Glu
>WENV183611617
OODT01000620
175857
Bacillota
GTG
His
>WENV183612033
OODT01004040
175857
Bacillota
GTG
His
>WENV183611143
OODT01000014
285756
Bacillota
GCC
Gly
>WENV183611799
OODT01001307
285756
Bacillota
GCC
Gly
>WENV183611862
OODT01001672
398833
Bacillota
TGT
Thr
>WENV183611998
OODT01003374
398833
Bacillota
TGT
Thr
>WENV183611655
OODT01000717
175849
Bacillota
GTC
Asp
>WENV183611758
OODT01001054
175849
Bacillota
GTC
Asp
>WENV183611846
OODT01001570
175849
Bacillota
GTC
Asp
>WENV183611932
OODT01002364
175849
Bacillota
GTC
Asp
>WENV183612149
OODT01012416
280486
Bacillota
TGC
Ala
>WENV183611952
OODT01002543
56074
Bacillota
TGA
Ser
>WENV183611821
OODT01001455
280473
Bacillota
TGG
Pro
>WENV183612008
OODT01003541
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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